RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 KPNA6O60684 536 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 ZNF286BP0CG31 522 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 HOXD8P13378 290 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-204ENST00000430682 APOBRQ0VD83 1088 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 PPIGQ13427 754 aaKnown RBP eCLIP14.43□□□□□ -0.12e-7■■■□□ 17.6
SMPD4-204ENST00000430682 LAMC2Q13753 1193 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 BRDTQ58F21 947 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-204ENST00000430682 WWC2Q6AWC2 1192 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 NFRKBQ6P4R8 1299 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 Q6ZUG5 572 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 TMEM199Q8N511 208 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 JAKMIP1Q96N16 626 aaKnown RBP14.43□□□□□ -0.1
SMPD4-204ENST00000430682 INPP4AQ96PE3 977 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-204ENST00000430682 SEZ6LQ9BYH1 1024 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 SEC63Q9UGP8 760 aaKnown RBP14.43□□□□□ -0.1
SMPD4-204ENST00000430682 WDR81Q562E7 1941 aa14.43□□□□□ -0.1
SMPD4-204ENST00000430682 SPATA31C2B4DYI2 1134 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 HAS3O00219 553 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 ZBTB43O43298 467 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 ICAM3P32942 547 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 ADD1P35611 737 aaKnown RBP14.42□□□□□ -0.1
SMPD4-204ENST00000430682 PSEN2P49810 448 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 SMAD3P84022 425 aaKnown RBP14.42□□□□□ -0.1
SMPD4-204ENST00000430682 GPNMBQ14956 572 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 RTN1Q16799 776 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 PPTC7Q8NI37 304 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 SMARCC2Q8TAQ2 1214 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 DHX38Q92620 1227 aaKnown RBP14.42□□□□□ -0.1
SMPD4-204ENST00000430682 WNT8BQ93098 351 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 PSTPIP2Q9H939 334 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 HDAC6Q9UBN7 1215 aa14.42□□□□□ -0.1
SMPD4-204ENST00000430682 GOLGA8AA7E2F4 631 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 GOLGA8BA8MQT2 603 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 ATP9AO75110 1047 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 F2P00734 622 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 CASTP20810 708 aaKnown RBP14.41□□□□□ -0.1
SMPD4-204ENST00000430682 PBX2P40425 430 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
SMPD4-204ENST00000430682 KRT32Q14532 448 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 DGKDQ16760 1214 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 PCNX4Q63HM2 1172 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 HEATR3Q7Z4Q2 680 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 SESTD1Q86VW0 696 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 BRF1Q92994 677 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 SPATA33Q96N06 139 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 C16orf70Q9BSU1 422 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 ALG1Q9BT22 464 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 SEMA6BQ9H3T3 888 aa14.41□□□□□ -0.1
SMPD4-204ENST00000430682 V9GY48 417 aaPredicted RBP14.41□□□□□ -0.1
SMPD4-204ENST00000430682 VCANP13611 3396 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 NEFLP07196 543 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 TGFB3P10600 412 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 RPS6KB1P23443 525 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 PTPN11Q06124 597 aaPredicted RBP14.4□□□□□ -0.1
SMPD4-204ENST00000430682 MFSD10Q14728 455 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 PTGISQ16647 500 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 KIAA0753Q2KHM9 967 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 KCNV1Q6PIU1 500 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 CYFIP1Q7L576 1253 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 OTOP2Q7RTS6 562 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 HERVK_113Q902F9 699 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 PGBD1Q96JS3 809 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 USP26Q9BXU7 913 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 AGXT2Q9BYV1 514 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 PPP4R2Q9NY27 417 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 GTF2IRD1Q9UHL9 959 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 LOXHD1Q8IVV2 1947 aa14.4□□□□□ -0.1
SMPD4-204ENST00000430682 SIP14410 1827 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 CUL9Q8IWT3 2517 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-204ENST00000430682 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-204ENST00000430682 STXBP3O00186 592 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 PPFIA3O75145 1194 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 PPFIA4O75335 1185 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 FGBP02675 491 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 SUPT20HL2P0C7V6 817 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 ITGB5P18084 799 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 TCTN1Q2MV58 587 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 PSRC1Q6PGN9 363 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-204ENST00000430682 DEFB128Q7Z7B8 93 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 CUL5Q93034 780 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 MLXIPQ9HAP2 919 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 RBM28Q9NW13 759 aaKnown RBP14.39□□□□□ -0.11
SMPD4-204ENST00000430682 TMEM260Q9NX78 707 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 PCDHA6Q9UN73 950 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 PCDHA8Q9Y5H6 950 aa14.39□□□□□ -0.11
SMPD4-204ENST00000430682 FIBPO43427 364 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 LGALS2P05162 132 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 HMGB1P09429 215 aaKnown RBP14.38□□□□□ -0.11
SMPD4-204ENST00000430682 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 DNAJB2P25686 324 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 NTRK3Q16288 839 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 PKN1Q16512 942 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 TRIM71Q2Q1W2 868 aaKnown RBP14.38□□□□□ -0.11
SMPD4-204ENST00000430682 ZNF697Q5TEC3 545 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 BLOC1S2Q6QNY1 142 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 TRIM50Q86XT4 487 aa14.38□□□□□ -0.11
SMPD4-204ENST00000430682 CYP2W1Q8TAV3 490 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms