RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 USP17L6PQ6QN14 398 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 TMCO2Q7Z6W1 182 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-202ENST00000430200 CATIPQ7Z7H3 387 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 SESTD1Q86VW0 696 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 RASEFQ8IZ41 740 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 PPTC7Q8NI37 304 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 COL25A1Q9BXS0 654 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-202ENST00000430200 SEZ6LQ9BYH1 1024 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 ANO2Q9NQ90 1003 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 HDAC6Q9UBN7 1215 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
HDAC4-202ENST00000430200 CNTNAP5Q8WYK1 1306 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-202ENST00000430200 PITPNM1O00562 1244 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 MEIS2O14770 477 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 IQCF3P0C7M6 154 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 PSEN2P49810 448 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 PTGISQ16647 500 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 ADCK5Q3MIX3 580 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 CELF3Q5SZQ8 465 aaKnown RBP13.64□□□□□ -0.23
HDAC4-202ENST00000430200 TRIM50Q86XT4 487 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-202ENST00000430200 ALG1Q9BT22 464 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 OSBPL7Q9BZF2 842 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 GTF2IRD1Q9UHL9 959 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 BDP1A6H8Y1 2624 aa13.64□□□□□ -0.23
HDAC4-202ENST00000430200 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
HDAC4-202ENST00000430200 EPOPA6NHQ4 379 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 B4DLN1 442 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 KPNA6O60684 536 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 MRPL12P52815 198 aaKnown RBP13.63□□□□□ -0.23
HDAC4-202ENST00000430200 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-202ENST00000430200 MFSD10Q14728 455 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
HDAC4-202ENST00000430200 UBE2SQ16763 222 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 KIAA0753Q2KHM9 967 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 BRDTQ58F21 947 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-202ENST00000430200 TYW1BQ6NUM6 668 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 CENPQQ7L2Z9 268 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-202ENST00000430200 MAP3K14Q99558 947 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 C16orf70Q9BSU1 422 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 BRWD1Q9NSI6 2320 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
HDAC4-202ENST00000430200 ZBBXA8MT70 800 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 NBNO60934 754 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 SUPT20HL2P0C7V6 817 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 CCND2P30279 289 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 HOXC8P31273 242 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 MCM5P33992 734 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 RBL2Q08999 1139 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 DGKDQ16760 1214 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 TMTC3Q6ZXV5 915 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 MICU3Q86XE3 530 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 DHX37Q8IY37 1157 aaKnown RBP13.62□□□□□ -0.23
HDAC4-202ENST00000430200 CTCFLQ8NI51 663 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-202ENST00000430200 SPATA33Q96N06 139 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 BRPF3Q9ULD4 1205 aa13.62□□□□□ -0.23
HDAC4-202ENST00000430200 ADAMTS3O15072 1205 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 CKBP12277 381 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 CPA1P15085 419 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 ATP2A2P16615 1042 aaKnown RBP13.61□□□□□ -0.23
HDAC4-202ENST00000430200 CASTP20810 708 aaKnown RBP13.61□□□□□ -0.23
HDAC4-202ENST00000430200 LIFRP42702 1097 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 DEFB103AP81534 67 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 FUT2Q10981 343 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 LAMC2Q13753 1193 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 APOA5Q6Q788 366 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 CASC1Q6TDU7 716 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 LRRC8DQ7L1W4 858 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 CCDC82Q8N4S0 544 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 TMEM87BQ96K49 555 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 MAP3K20Q9NYL2 800 aaKnown RBP13.61□□□□□ -0.23
HDAC4-202ENST00000430200 RTEL1Q9NZ71 1219 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 SLC4A7Q9Y6M7 1214 aa13.61□□□□□ -0.23
HDAC4-202ENST00000430200 LCHNA4D1U4 455 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 RFXAPO00287 272 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 PIK3CDO00329 1044 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 LGALS2P05162 132 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 CA3P07451 260 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 PFKMP08237 780 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 ICAM3P32942 547 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 EXOSC10Q01780 885 aaKnown RBP13.6□□□□□ -0.23
HDAC4-202ENST00000430200 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-202ENST00000430200 RAB30Q15771 203 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 WWC2Q6AWC2 1192 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 NFXL1Q6ZNB6 911 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 AFAP1L1Q8TED9 768 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 RRP36Q96EU6 259 aaKnown RBP13.6□□□□□ -0.23
HDAC4-202ENST00000430200 MTA3Q9BTC8 594 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 NOD1Q9Y239 953 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 C5orf42Q9H799 3197 aa13.6□□□□□ -0.23
HDAC4-202ENST00000430200 CCDC69A6NI79 296 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 SPATA31C2B4DYI2 1134 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 ATP9AO75110 1047 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 CXCL10P02778 98 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 SELPP16109 830 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 ITGB5P18084 799 aa13.59□□□□□ -0.23
HDAC4-202ENST00000430200 RFC2P35250 354 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms