RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SGSM2O43147 1006 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 GTPBP6O43824 516 aaPredicted RBP17.25■□□□□ 0.35
MSH5-208ENST00000429846 EFCAB14O75071 495 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 STAM2O75886 525 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 GGPS1O95749 300 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 CXCL10P02778 98 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 ZNF286BP0CG31 522 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 CKBP12277 381 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 UBA1P22314 1058 aaKnown RBP17.25■□□□□ 0.35
MSH5-208ENST00000429846 HOXA13P31271 388 aaPredicted RBP17.25■□□□□ 0.35
MSH5-208ENST00000429846 PTH1RQ03431 593 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 CCDC85BQ15834 202 aaPredicted RBP17.25■□□□□ 0.35
MSH5-208ENST00000429846 CELF3Q5SZQ8 465 aaKnown RBP17.25■□□□□ 0.35
MSH5-208ENST00000429846 CATIPQ7Z7H3 387 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 SPATA33Q96N06 139 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 FRMPD4Q14CM0 1322 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 NCOR1O75376 2440 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 TNFRSF10AO00220 468 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 CYTH3O43739 400 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 WDR5P61964 334 aaKnown RBP17.24■□□□□ 0.35
MSH5-208ENST00000429846 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 GNPTABQ3T906 1256 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 MAP3K14Q99558 947 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
MSH5-208ENST00000429846 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
MSH5-208ENST00000429846 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
MSH5-208ENST00000429846 EMSYQ7Z589 1322 aa17.23■□□□□ 0.35
MSH5-208ENST00000429846 COL4A4P53420 1690 aaPredicted RBP17.23■□□□□ 0.35
MSH5-208ENST00000429846 ABHD14A-ACY1A0A1B0GW23 586 aa17.23■□□□□ 0.35
MSH5-208ENST00000429846 TLL1O43897 1013 aa17.23■□□□□ 0.35
MSH5-208ENST00000429846 TAP1Q03518 808 aa17.23■□□□□ 0.35
MSH5-208ENST00000429846 GPNMBQ14956 572 aa17.23■□□□□ 0.35
MSH5-208ENST00000429846 IL31RAQ8NI17 732 aa17.23■□□□□ 0.35
MSH5-208ENST00000429846 MLXIPQ9HAP2 919 aa17.23■□□□□ 0.35
MSH5-208ENST00000429846 TRANK1O15050 2925 aa17.23■□□□□ 0.35
MSH5-208ENST00000429846 NBNO60934 754 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 KIF5BP33176 963 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 AAK1Q2M2I8 961 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 MB21D2Q8IYB1 491 aaPredicted RBP17.22■□□□□ 0.35
MSH5-208ENST00000429846 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 MAP4K1Q92918 833 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 INPP4AQ96PE3 977 aaPredicted RBP17.22■□□□□ 0.35
MSH5-208ENST00000429846 C16orf70Q9BSU1 422 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 SPZ1Q9BXG8 430 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 SENP2Q9HC62 589 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 MTCH2Q9Y6C9 303 aa17.22■□□□□ 0.35
MSH5-208ENST00000429846 DDAH1O94760 285 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 ICAM3P32942 547 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 ANTXR2P58335 489 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 SP2Q02086 613 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 NEDD9Q14511 834 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 TRIM71Q2Q1W2 868 aaKnown RBP17.21■□□□□ 0.35
MSH5-208ENST00000429846 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.35
MSH5-208ENST00000429846 IGDCC4Q8TDY8 1250 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 ADAMTS19Q8TE59 1207 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 ARNTL2Q8WYA1 636 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 MICAL3Q7RTP6 2002 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 SIP14410 1827 aa17.21■□□□□ 0.35
MSH5-208ENST00000429846 H3BRB1 525 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 NOP56O00567 594 aaKnown RBP17.2■□□□□ 0.34
MSH5-208ENST00000429846 HOXC8P31273 242 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 IKBKEQ14164 716 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 ZNF618Q5T7W0 954 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 XRRA1Q6P2D8 792 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 TRAF7Q6Q0C0 670 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 CASC1Q6TDU7 716 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 METTL7BQ6UX53 244 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 SERINC5Q86VE9 423 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 RRP36Q96EU6 259 aaKnown RBP17.2■□□□□ 0.34
MSH5-208ENST00000429846 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 ZBED2Q9BTP6 218 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 USP26Q9BXU7 913 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 TUT1Q9H6E5 874 aaKnown RBP17.2■□□□□ 0.34
MSH5-208ENST00000429846 CERS4Q9HA82 394 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 SEC63Q9UGP8 760 aaKnown RBP17.2■□□□□ 0.34
MSH5-208ENST00000429846 RBM8AQ9Y5S9 174 aaKnown RBP17.2■□□□□ 0.34
MSH5-208ENST00000429846 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 DOCK5Q9H7D0 1870 aa17.2■□□□□ 0.34
MSH5-208ENST00000429846 C17orf102A2RUQ5 167 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 EPOPA6NHQ4 379 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 FIBPO43427 364 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 CAND2O75155 1236 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 ARHGEF15O94989 841 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 GJB5O95377 273 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 LGALS2P05162 132 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 GNAQP50148 359 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 DEFB103AP81534 67 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 GPKOWQ92917 476 aaPredicted RBP eCLIP17.19■□□□□ 0.34
MSH5-208ENST00000429846 CUL5Q93034 780 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 WNT8BQ93098 351 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 UHRF1Q96T88 793 aaPredicted RBP17.19■□□□□ 0.34
MSH5-208ENST00000429846 RAD9AQ99638 391 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 LY9Q9HBG7 655 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms