RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 MTMR2Q13614 643 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 KIAA0753Q2KHM9 967 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 MYOCDQ8IZQ8 938 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 RDH13Q8NBN7 331 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 PARD3BQ8TEW8 1205 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 TEX13BQ9BXU2 312 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 USP44Q9H0E7 712 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 RPAP3Q9H6T3 665 aaPredicted RBP7.99□□□□□ -1.13
CNOT4-206ENST00000428680 TOPORSQ9NS56 1045 aaPredicted RBP7.99□□□□□ -1.13
CNOT4-206ENST00000428680 MYPNQ86TC9 1320 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 IGKV5-2P06315 115 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 POTEIP0CG38 1075 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 SRGAP2CP0DJJ0 459 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 RECQLP46063 649 aaPredicted RBP7.99□□□□□ -1.13
CNOT4-206ENST00000428680 CASP7P55210 303 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 BRAPQ7Z569 592 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 FAM178BQ8IXR5 827 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 ANKRD13CQ8N6S4 541 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 SREK1Q8WXA9 508 aaKnown RBP7.99□□□□□ -1.13
CNOT4-206ENST00000428680 HMX1Q9NP08 348 aaPredicted RBP7.99□□□□□ -1.13
CNOT4-206ENST00000428680 MSRAQ9UJ68 235 aa7.99□□□□□ -1.13
CNOT4-206ENST00000428680 ATP8B3O60423 1300 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 PNMA6EA0A0J9YXQ4 647 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 BNIP3LO60238 219 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 EVI5O60447 810 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 STK10O94804 968 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 STAMBPO95630 424 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 TXNP10599 105 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 PPP1R2P41236 205 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 GOLGA8FQ08AF8 430 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 GOLGA8DPQ0D2H9 430 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 BBS5Q8N3I7 341 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 NEK11Q8NG66 645 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 RAB3IL1Q8TBN0 382 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 EDC3Q96F86 508 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 CPA4Q9UI42 421 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 FAM184BQ9ULE4 1060 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 CDK8P49336 464 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 NUCB1Q02818 461 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 GSTA5Q7RTV2 222 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 TPCN1Q9ULQ1 816 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 GOLGA6L10A0A0M3HER8 536 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 SLC25A27O95847 323 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 SUPT20HL2P0C7V6 817 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 PTPN12Q05209 780 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 MTX1Q13505 466 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 POSTNQ15063 836 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 CACTINQ8WUQ7 758 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 MRPS27Q92552 414 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 OPTNQ96CV9 577 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 FAM227BQ96M60 508 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 SPATA33Q96N06 139 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 VPS54Q9P1Q0 977 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 CPSF3Q9UKF6 684 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 SCAF8Q9UPN6 1271 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 AGTPBP1Q9UPW5 1226 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 KDM3AQ9Y4C1 1321 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 K7ENM7 598 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 CTSHP09668 335 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 NFKBIAP25963 317 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 NNMTP40261 264 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 NASPP49321 788 aaPredicted RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 FOXO4P98177 505 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 CNNM4Q6P4Q7 775 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 DYMQ7RTS9 669 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 THEM5Q8N1Q8 247 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 PCSK9Q8NBP7 692 aaKnown RBP7.98□□□□□ -1.13
CNOT4-206ENST00000428680 PPP1R14CQ8TAE6 165 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 DYNLL2Q96FJ2 89 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 FAM50BQ9Y247 325 aa7.98□□□□□ -1.13
CNOT4-206ENST00000428680 LOC102724159A0A0B4J2E5 919 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 TMEM110-MUSTN1A8MSY1 372 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 ATP2A1O14983 1001 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 PWP2Q15269 919 aaKnown RBP7.97□□□□□ -1.13
CNOT4-206ENST00000428680 C3orf67Q6ZVT6 689 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 OTOP1Q7RTM1 612 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 MSL3Q8N5Y2 521 aaKnown RBP7.97□□□□□ -1.13
CNOT4-206ENST00000428680 FAM149B1Q96BN6 582 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 EAF2Q96CJ1 260 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-206ENST00000428680 MIS12Q9H081 205 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 FAM204AQ9H8W3 233 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 STARD7Q9NQZ5 370 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 SRRDQ9UH36 339 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 DDX25Q9UHL0 483 aaKnown RBP7.97□□□□□ -1.13
CNOT4-206ENST00000428680 MAST2Q6P0Q8 1798 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 PLCB4Q15147 1175 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 CDC37Q16543 378 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-206ENST00000428680 NEK8Q86SG6 692 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 RNF139Q8WU17 664 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 POMGNT1Q8WZA1 660 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 TBC1D7Q9P0N9 293 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 E7EVH7 732 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 GJB1P08034 283 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 PSMC4P43686 418 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 BFSP2Q13515 415 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 RASGRF1Q13972 1273 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 FAM110CQ1W6H9 321 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 BLIDQ8IZY5 108 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms