RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 IGHA2P01877 340 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 TXKP42681 527 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 SP3Q02447 781 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 SPIRE1Q08AE8 756 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 MAP2K5Q13163 448 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 SEMA3FQ13275 785 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 DPP9Q86TI2 863 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 DNAJC5GQ8N7S2 189 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 GJA10Q969M2 543 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 TRIM47Q96LD4 638 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 AK8Q96MA6 479 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 MPHOSPH6Q99547 160 aaKnown RBP14.13□□□□□ -0.15
TRIM39-207ENST00000428404 RIT2Q99578 217 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 TTC12Q9H892 705 aaPredicted RBP14.13□□□□□ -0.15
TRIM39-207ENST00000428404 AGO4Q9HCK5 861 aaKnown RBP14.13□□□□□ -0.15
TRIM39-207ENST00000428404 PCDHA12Q9UN75 941 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 IPO5O00410 1097 aaKnown RBP14.12□□□□□ -0.15
TRIM39-207ENST00000428404 TNPO2O14787 897 aaKnown RBP14.12□□□□□ -0.15
TRIM39-207ENST00000428404 TECP42680 631 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 PSMC4P43686 418 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 FCGRTP55899 365 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 CAP1Q01518 475 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 PDE4DQ08499 809 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 MTMR1Q13613 665 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 B3GNT9Q6UX72 402 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 USP49Q70CQ1 688 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 NLRX1Q86UT6 975 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 MSL3Q8N5Y2 521 aaKnown RBP14.12□□□□□ -0.15
TRIM39-207ENST00000428404 ENGASEQ8NFI3 743 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 NPLOC4Q8TAT6 608 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 SOCS4Q8WXH5 440 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 MAML3Q96JK9 1138 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 CDHR1Q96JP9 859 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 NUDT12Q9BQG2 462 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 ARHGAP39Q9C0H5 1083 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 GOLPH3LQ9H4A5 285 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 SLC5A4Q9NY91 659 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 VAV3Q9UKW4 847 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 HPSEQ9Y251 543 aa14.12□□□□□ -0.15
TRIM39-207ENST00000428404 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 GPR25O00155 361 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 MBD3O95983 291 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 LIG1P18858 919 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
TRIM39-207ENST00000428404 ITGB3BPQ13352 177 aaPredicted RBP14.11□□□□□ -0.15
TRIM39-207ENST00000428404 SNW1Q13573 536 aaKnown RBP14.11□□□□□ -0.15
TRIM39-207ENST00000428404 SKOR2Q2VWA4 1001 aaPredicted RBP14.11□□□□□ -0.15
TRIM39-207ENST00000428404 SPECC1Q5M775 1068 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 ARMCX2Q7L311 632 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 OTOP1Q7RTM1 612 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 DOCK3Q8IZD9 2030 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 FSIP1Q8NA03 581 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 MRPS27Q92552 414 aaKnown RBP14.11□□□□□ -0.15
TRIM39-207ENST00000428404 EPSTI1Q96J88 318 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 UIMC1Q96RL1 719 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 ZNF577Q9BSK1 485 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 CCSER1Q9C0I3 900 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 KATNBL1Q9H079 304 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 SYNGAP1Q96PV0 1343 aa14.11□□□□□ -0.15
TRIM39-207ENST00000428404 A0A1B0GVL5 298 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 TRAK2O60296 914 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 MARCH6O60337 910 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 ATP9AO75110 1047 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 SNAI1O95863 264 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-207ENST00000428404 TGFB3P10600 412 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 XRCC5P13010 732 aaKnown RBP14.1□□□□□ -0.15
TRIM39-207ENST00000428404 KCNA2P16389 499 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 RGS2P41220 211 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 NDUFA8P51970 172 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 FAM160A1Q05DH4 1040 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 PPP2R5CQ13362 524 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 TMEM266Q2M3C6 531 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 KLHL40Q2TBA0 621 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 GNPTABQ3T906 1256 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 LRCH2Q5VUJ6 765 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 OLFML2BQ68BL8 750 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 FMR1NBQ8N0W7 255 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-207ENST00000428404 SYMPKQ92797 1274 aaKnown RBP14.1□□□□□ -0.15
TRIM39-207ENST00000428404 SENP7Q9BQF6 1050 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 TINF2Q9BSI4 451 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 MMTAG2Q9BU76 263 aaKnown RBP14.1□□□□□ -0.15
TRIM39-207ENST00000428404 TBC1D22BQ9NU19 505 aa14.1□□□□□ -0.15
TRIM39-207ENST00000428404 PCNTO95613 3336 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 RBM47A0AV96 593 aaKnown RBP14.09□□□□□ -0.15
TRIM39-207ENST00000428404 PP2D1A8MPX8 630 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 NR1I2O75469 434 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 PFKFB1P16118 471 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 CDC25AP30304 524 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 IRF5Q13568 498 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 KIF22Q14807 665 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 TAPT1Q6NXT6 567 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 CCDC62Q6P9F0 684 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 SEPT14Q6ZU15 432 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 APBA2Q99767 749 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 RAB34Q9BZG1 259 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 VTA1Q9NP79 307 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 WBP1LQ9NX94 342 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 FLRT1Q9NZU1 646 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 LRWD1Q9UFC0 647 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 KCNH3Q9ULD8 1083 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms