RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 PTGISQ16647 500 aa17.77■□□□□ 0.44
TSPO-204ENST00000428336 HSDL1Q3SXM5 330 aa17.77■□□□□ 0.44
TSPO-204ENST00000428336 GDF6Q6KF10 455 aaPredicted RBP17.77■□□□□ 0.44
TSPO-204ENST00000428336 OTOP2Q7RTS6 562 aa17.77■□□□□ 0.44
TSPO-204ENST00000428336 RPUSD2Q8IZ73 545 aaKnown RBP17.77■□□□□ 0.44
TSPO-204ENST00000428336 CUL5Q93034 780 aa17.77■□□□□ 0.44
TSPO-204ENST00000428336 SPATA33Q96N06 139 aa17.77■□□□□ 0.44
TSPO-204ENST00000428336 INPP4AQ96PE3 977 aaPredicted RBP17.77■□□□□ 0.44
TSPO-204ENST00000428336 CDX2Q99626 313 aaPredicted RBP17.77■□□□□ 0.44
TSPO-204ENST00000428336 BCAS3Q9H6U6 928 aa17.77■□□□□ 0.44
TSPO-204ENST00000428336 COL6A3P12111 3177 aa17.77■□□□□ 0.43
TSPO-204ENST00000428336 SPATA31C2B4DYI2 1134 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 ZNF286BP0CG31 522 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 PSEN2P49810 448 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 FUT2Q10981 343 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 SEMA3FQ13275 785 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 GNPTABQ3T906 1256 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 SYNE3Q6ZMZ3 975 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 PSTPIP2Q9H939 334 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 RTEL1Q9NZ71 1219 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 HDAC6Q9UBN7 1215 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 GTF2IRD1Q9UHL9 959 aa17.76■□□□□ 0.43
TSPO-204ENST00000428336 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 IQCF3P0C7M6 154 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 HSPA4P34932 840 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 PBX2P40425 430 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 BFSP2Q13515 415 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 MFSD10Q14728 455 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 KIAA0753Q2KHM9 967 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 PCNX4Q63HM2 1172 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 C16orf70Q9BSU1 422 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 ALG1Q9BT22 464 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 KATNAL1Q9BW62 490 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 PBX4Q9BYU1 374 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 MLXIPQ9HAP2 919 aa17.75■□□□□ 0.43
TSPO-204ENST00000428336 FAM217BQ9NTX9 383 aaPredicted RBP17.75■□□□□ 0.43
TSPO-204ENST00000428336 RBM28Q9NW13 759 aaKnown RBP17.75■□□□□ 0.43
TSPO-204ENST00000428336 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 KIAA1217Q5T5P2 1943 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 FIBPO43427 364 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 PFKMP08237 780 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 HMGB1P09429 215 aaKnown RBP17.74■□□□□ 0.43
TSPO-204ENST00000428336 XRRA1Q6P2D8 792 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 RETREG2Q8NC44 543 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 SLC17A8Q8NDX2 589 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 DHX38Q92620 1227 aaKnown RBP17.74■□□□□ 0.43
TSPO-204ENST00000428336 TIFAQ96CG3 184 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
TSPO-204ENST00000428336 NOD1Q9Y239 953 aa17.74■□□□□ 0.43
TSPO-204ENST00000428336 ZBTB43O43298 467 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 CPA1P15085 419 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 RFC2P35250 354 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 NEDD9Q14511 834 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 GRIN2CQ14957 1233 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 UBE2SQ16763 222 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 RTN1Q16799 776 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 METTL7BQ6UX53 244 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 DEFB128Q7Z7B8 93 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 C7orf31Q8N865 590 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 CAGE1Q8TC20 777 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 MYLIPQ8WY64 445 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 ZNF576Q9H609 170 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
TSPO-204ENST00000428336 KLF18A0A0U1RQI7 1052 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 CDC27P30260 824 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 RCAN1P53805 252 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 RBL2Q08999 1139 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 HIC1Q14526 733 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 GPNMBQ14956 572 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 WWC2Q6AWC2 1192 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 TYW1BQ6NUM6 668 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 CYFIP1Q7L576 1253 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 JAKMIP1Q96N16 626 aaKnown RBP17.72■□□□□ 0.43
TSPO-204ENST00000428336 SENP7Q9BQF6 1050 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 TELO2Q9Y4R8 837 aa17.72■□□□□ 0.43
TSPO-204ENST00000428336 V9GY48 417 aaPredicted RBP17.72■□□□□ 0.43
TSPO-204ENST00000428336 GOLGA8AA7E2F4 631 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 GOLGA8BA8MQT2 603 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 LGALS2P05162 132 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 ITGB5P18084 799 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 ZNF200P98182 395 aaPredicted RBP17.71■□□□□ 0.43
TSPO-204ENST00000428336 AFAP1L1Q8TED9 768 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 GPR20Q99678 358 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 PCDHA6Q9UN73 950 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 PCDHA8Q9Y5H6 950 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 SLC4A7Q9Y6M7 1214 aa17.71■□□□□ 0.43
TSPO-204ENST00000428336 H3BRB1 525 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 ATP9AO75110 1047 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 PTK7Q13308 1070 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 RAB30Q15771 203 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 TRIM71Q2Q1W2 868 aaKnown RBP17.7■□□□□ 0.42
TSPO-204ENST00000428336 Q6ZUG5 572 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 NLRX1Q86UT6 975 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 CCDC155Q8N6L0 562 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 WNT8BQ93098 351 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 GPRASP2Q96D09 838 aa17.7■□□□□ 0.42
TSPO-204ENST00000428336 TUT1Q9H6E5 874 aaKnown RBP17.7■□□□□ 0.42
TSPO-204ENST00000428336 YBX2Q9Y2T7 364 aaKnown RBP17.7■□□□□ 0.42
TSPO-204ENST00000428336 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms