RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 RTN1Q16799 776 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ANKRD33Q7Z3H0 272 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TDHQ8IZJ6 230 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 BADQ92934 168 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 KCNB2Q92953 911 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ZDHHC16Q969W1 377 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TRIM43Q96BQ3 446 aaPredicted RBP10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PDCD2LQ9BRP1 358 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TMEM39AQ9NV64 488 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 RANBP2P49792 3224 aaKnown RBP10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CNTNAP5Q8WYK1 1306 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 LCTP09848 1927 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 KIAA0355O15063 1070 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 RAG1P15918 1043 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ITGB8P26012 769 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 SMARCA1P28370 1054 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 FAAP100Q0VG06 881 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ITGA7Q13683 1181 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PGM5Q15124 567 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 LY6KQ17RY6 165 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 BRDTQ58F21 947 aaPredicted RBP10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CCDC62Q6P9F0 684 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 Q6ZUG5 572 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 HEATR3Q7Z4Q2 680 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 SMARCC2Q8TAQ2 1214 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 GPKOWQ92917 476 aaPredicted RBP eCLIP10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CUL5Q93034 780 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TOX2Q96NM4 488 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 RBM28Q9NW13 759 aaKnown RBP10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MAP3K20Q9NYL2 800 aaKnown RBP10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MRVI1Q9Y6F6 885 aa10.63□□□□□ -0.71
RFX3-AS1-202ENST00000427722 SOX1O00570 391 aaPredicted RBP10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 SORBS3O60504 671 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 EIF3JO75822 258 aaKnown RBP10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 GH1P01241 217 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CASTP20810 708 aaKnown RBP10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CCND2P30279 289 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CDK7P50613 346 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PURAQ00577 322 aaKnown RBP10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ARHGAP1Q07960 439 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 APOBRQ0VD83 1088 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 USP17L6PQ6QN14 398 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 FAM126BQ8IXS8 530 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 SAMD3Q8N6K7 520 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 AFG1LQ8WV93 481 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 BRF1Q92994 677 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MTG1Q9BT17 334 aaPredicted RBP10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PPP1R12CQ9BZL4 782 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 WDR70Q9NW82 654 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TBX21Q9UL17 535 aa10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ZNFX1Q9P2E3 1918 aaKnown RBP10.62□□□□□ -0.71
RFX3-AS1-202ENST00000427722 GRIN2DO15399 1336 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TLR3O15455 904 aaKnown RBP10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MMP3P08254 477 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 RPS6KB1P23443 525 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PSMA5P28066 241 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 METAP2P50579 478 aaKnown RBP eCLIP10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 RCAN1P53805 252 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CHMP4BP1P59074 171 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 UBE2SQ16763 222 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 FAM47CQ5HY64 1035 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 WWC2Q6AWC2 1192 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 VSIG10LQ86VR7 867 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 SLC43A3Q8NBI5 491 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PPP1R13LQ8WUF5 828 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 LRCH3Q96II8 777 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ADAM33Q9BZ11 813 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PSTPIP2Q9H939 334 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 DDX41Q9UJV9 622 aaKnown RBP10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PCDHGA10Q9Y5H3 936 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MCM3APO60318 1980 aa10.61□□□□□ -0.71
RFX3-AS1-202ENST00000427722 FRMPD4Q14CM0 1322 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 A6NJR5 290 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PIK3CDO00329 1044 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MEIS2O14770 477 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 HRO43593 1189 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 B4GALT4O60513 344 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 RGS20O76081 388 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 UBA1P22314 1058 aaKnown RBP10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CDC27P30260 824 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 NAPAP54920 295 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 FPGSQ05932 587 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 FUT2Q10981 343 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 E2F4Q16254 413 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 GNPTABQ3T906 1256 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 C9orf50Q5SZB4 431 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TRPV6Q9H1D0 765 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ALDH8A1Q9H2A2 487 aaPredicted RBP10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 FAM217BQ9NTX9 383 aaPredicted RBP10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TRMT13Q9NUP7 481 aaKnown RBP10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 SMCHD1A6NHR9 2005 aa10.6□□□□□ -0.71
RFX3-AS1-202ENST00000427722 EPB41L2O43491 1005 aaKnown RBP10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 KPNA6O60684 536 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 GGPS1O95749 300 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TIMP1P01033 207 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ZNF286BP0CG31 522 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 EPHB4P54760 987 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms