RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PPP1R9BQ96SB3 815 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 PDCD2LQ9BRP1 358 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 GLT8D2Q9H1C3 349 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.72■□□□□ 0.43
SHOX2-202ENST00000425436 PCDHA7Q9UN72 937 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 CLIC4Q9Y696 253 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 SYNGAP1Q96PV0 1343 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 KINO60870 393 aaKnown RBP17.72■□□□□ 0.43
SHOX2-202ENST00000425436 CNGA1P29973 690 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 MAP3K21Q5TCX8 1036 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
SHOX2-202ENST00000425436 OXER1Q8TDS5 423 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 MORC4Q8TE76 937 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 ARMC5Q96C12 935 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 ZNF333Q96JL9 665 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 IWS1Q96ST2 819 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 FUCA2Q9BTY2 467 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 UNC93B1Q9H1C4 597 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 ZHX1Q9UKY1 873 aaPredicted RBP17.72■□□□□ 0.43
SHOX2-202ENST00000425436 CEP131Q9UPN4 1083 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 NR1I2O75469 434 aa17.71■□□□□ 0.43
SHOX2-202ENST00000425436 CMA1P23946 247 aa17.71■□□□□ 0.43
SHOX2-202ENST00000425436 EDNRBP24530 442 aa17.71■□□□□ 0.43
SHOX2-202ENST00000425436 ACVR2BQ13705 512 aa17.71■□□□□ 0.43
SHOX2-202ENST00000425436 FBXO16Q8IX29 292 aaPredicted RBP17.71■□□□□ 0.43
SHOX2-202ENST00000425436 TNS4Q8IZW8 715 aa17.71■□□□□ 0.43
SHOX2-202ENST00000425436 MPHOSPH6Q99547 160 aaKnown RBP17.71■□□□□ 0.43
SHOX2-202ENST00000425436 ANO3Q9BYT9 981 aa17.71■□□□□ 0.43
SHOX2-202ENST00000425436 PDGFCQ9NRA1 345 aa17.71■□□□□ 0.43
SHOX2-202ENST00000425436 MORC2Q9Y6X9 1032 aaPredicted RBP17.71■□□□□ 0.43
SHOX2-202ENST00000425436 B4DLN1 442 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 BMP15O95972 392 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 FOSP01100 380 aaPredicted RBP17.7■□□□□ 0.42
SHOX2-202ENST00000425436 ZNF865P0CJ78 1059 aaPredicted RBP17.7■□□□□ 0.42
SHOX2-202ENST00000425436 CYBAP13498 195 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 CCL5P13501 91 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 STXBP2Q15833 593 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 VSIG10LQ86VR7 867 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 FSIP1Q8NA03 581 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 FTOQ9C0B1 505 aaKnown RBP eCLIP17.7■□□□□ 0.42
SHOX2-202ENST00000425436 KATNBL1Q9H079 304 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 RNF208Q9H0X6 261 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 ABHD16BQ9H3Z7 469 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 HMX1Q9NP08 348 aaPredicted RBP17.7■□□□□ 0.42
SHOX2-202ENST00000425436 RPTORQ8N122 1335 aa17.7■□□□□ 0.42
SHOX2-202ENST00000425436 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
SHOX2-202ENST00000425436 M0R2N6 131 aa17.69■□□□□ 0.42
SHOX2-202ENST00000425436 KRT2P35908 639 aa17.69■□□□□ 0.42
SHOX2-202ENST00000425436 MRPS9P82933 396 aaKnown RBP17.69■□□□□ 0.42
SHOX2-202ENST00000425436 NR5A1Q13285 461 aa17.69■□□□□ 0.42
SHOX2-202ENST00000425436 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
SHOX2-202ENST00000425436 DAGLBQ8NCG7 672 aa17.69■□□□□ 0.42
SHOX2-202ENST00000425436 ENGASEQ8NFI3 743 aa17.69■□□□□ 0.42
SHOX2-202ENST00000425436 TRIM44Q96DX7 344 aaPredicted RBP17.69■□□□□ 0.42
SHOX2-202ENST00000425436 FRMPD4Q14CM0 1322 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 LOC102724159A0A0B4J2E5 919 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 CCND2P30279 289 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 AP3B2Q13367 1082 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 PWP2Q15269 919 aaKnown RBP17.68■□□□□ 0.42
SHOX2-202ENST00000425436 CCDC144BQ3MJ40 725 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 TMEM63BQ5T3F8 832 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 TAPT1Q6NXT6 567 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 SEPT14Q6ZU15 432 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 LRRC37A2A6NM11 1700 aa17.68■□□□□ 0.42
SHOX2-202ENST00000425436 CUTAO60888 179 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 EIF3JO75822 258 aaKnown RBP17.67■□□□□ 0.42
SHOX2-202ENST00000425436 PTGS1P23219 599 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 ADCYAP1R1P41586 468 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 SNW1Q13573 536 aaKnown RBP17.67■□□□□ 0.42
SHOX2-202ENST00000425436 PTPAQ15257 358 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 PCNX4Q63HM2 1172 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 TEX2Q8IWB9 1127 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 ABHD8Q96I13 439 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.67■□□□□ 0.42
SHOX2-202ENST00000425436 EHMT1Q9H9B1 1298 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 VTA1Q9NP79 307 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
SHOX2-202ENST00000425436 KIAA1217Q5T5P2 1943 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.67■□□□□ 0.42
SHOX2-202ENST00000425436 RGS20O76081 388 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 TYRO3Q06418 890 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 CAMK4Q16566 473 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 HS1BP3Q53T59 392 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 EARS2Q5JPH6 523 aaKnown RBP17.67■□□□□ 0.42
SHOX2-202ENST00000425436 FMR1NBQ8N0W7 255 aaPredicted RBP17.67■□□□□ 0.42
SHOX2-202ENST00000425436 LENG1Q96BZ8 264 aaPredicted RBP17.67■□□□□ 0.42
SHOX2-202ENST00000425436 TIGD1Q96MW7 591 aa17.67■□□□□ 0.42
SHOX2-202ENST00000425436 FAM237AA0A1B0GTK4 181 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 FAM205CA6NFA0 338 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 SEPT4O43236 478 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 ADCY6O43306 1168 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 SREBF1P36956 1147 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 TRAPPC10P48553 1259 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 ARHGAP4P98171 946 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
SHOX2-202ENST00000425436 MCTP2Q6DN12 878 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 PIK3AP1Q6ZUJ8 805 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 KRI1Q8N9T8 703 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms