RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 ARVCFO00192 962 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 SGSM2O43147 1006 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 TADA3O75528 432 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 RFPL3O75679 317 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 NPTXRO95502 500 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 C8AP07357 584 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 GUCY1A3Q02108 690 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 TCEA2Q15560 299 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 STEAP3Q658P3 488 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 OTOP3Q7RTS5 596 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 AMIGO3Q86WK7 504 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 PDGFDQ9GZP0 370 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-209ENST00000425071 CD320Q9NPF0 282 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 SFMBT1Q9UHJ3 866 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 TRAF6Q9Y4K3 522 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 SMARCA4P51532 1647 aa5.69□□□□□ -1.5
HDAC9-209ENST00000425071 RSF1Q96T23 1441 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-209ENST00000425071 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-209ENST00000425071 B4E1Z4 1266 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 IRS4O14654 1257 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-209ENST00000425071 KRT1P04264 644 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 GNAT1P11488 350 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 FBLN1P23142 703 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 CDR1P51861 262 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 ZNF200P98182 395 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-209ENST00000425071 FAM47CQ5HY64 1035 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 C16orf86Q6ZW13 317 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 C16orf59Q7L2K0 433 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 MILR1Q7Z6M3 343 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 MIB1Q86YT6 1006 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 NLGN1Q8N2Q7 840 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 SLC52A2Q9HAB3 445 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 KCNK12Q9HB15 430 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 NDOR1Q9UHB4 597 aa5.68□□□□□ -1.5
HDAC9-209ENST00000425071 SMG5Q9UPR3 1016 aaKnown RBP5.68□□□□□ -1.5
HDAC9-209ENST00000425071 TLDC2A0PJX2 215 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 RFXAPO00287 272 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 CRTAMO95727 393 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 ASGR2P07307 311 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 C1QTNF9P0C862 333 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 YBX3P16989 372 aaKnown RBP eCLIP5.67□□□□□ -1.5
HDAC9-209ENST00000425071 IGFBP6P24592 240 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-209ENST00000425071 CAP1Q01518 475 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 CACNB2Q08289 660 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-209ENST00000425071 KCNA10Q16322 511 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 HABP4Q5JVS0 413 aaKnown RBP5.67□□□□□ -1.5
HDAC9-209ENST00000425071 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 ZC3H18Q86VM9 953 aaKnown RBP5.67□□□□□ -1.5
HDAC9-209ENST00000425071 IGDCC3Q8IVU1 814 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 FBXW5Q969U6 566 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 TOX2Q96NM4 488 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 JAM3Q9BX67 310 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 PALD1Q9ULE6 856 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 FAN1Q9Y2M0 1017 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
HDAC9-209ENST00000425071 PCDHB4Q9Y5E5 795 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 PCDHA8Q9Y5H6 950 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 PEG3Q9GZU2 1588 aa5.67□□□□□ -1.5
HDAC9-209ENST00000425071 BAZ1BQ9UIG0 1483 aaKnown RBP5.66□□□□□ -1.5
HDAC9-209ENST00000425071 ESYT3A0FGR9 886 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 DBX1A6NMT0 343 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 ENPP3O14638 875 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 BUB1BO60566 1050 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-209ENST00000425071 ST5P78524 1137 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 TAF7LQ5H9L4 462 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 B3GNT8Q7Z7M8 397 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 TMEM151BQ8IW70 566 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 ZC3H7AQ8IWR0 971 aaKnown RBP5.66□□□□□ -1.5
HDAC9-209ENST00000425071 FAM126BQ8IXS8 530 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 NLGN4XQ8N0W4 816 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 TTLL11Q8NHH1 800 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 PCDH19Q8TAB3 1148 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 UHMK1Q8TAS1 419 aaKnown RBP5.66□□□□□ -1.5
HDAC9-209ENST00000425071 SLC7A14Q8TBB6 771 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 SGPP1Q9BX95 441 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 IPPKQ9H8X2 491 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 INTS7Q9NVH2 962 aaKnown RBP5.66□□□□□ -1.5
HDAC9-209ENST00000425071 HSPBP1Q9NZL4 362 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 MYOTQ9UBF9 498 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 CNOT6Q9ULM6 557 aaKnown RBP5.66□□□□□ -1.5
HDAC9-209ENST00000425071 PCDHA9Q9Y5H5 950 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 HCFC2Q9Y5Z7 792 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 MROH2BQ7Z745 1585 aa5.66□□□□□ -1.5
HDAC9-209ENST00000425071 TCRBV5S2A0A599 114 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 CDC45O75419 566 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 ASMTLO95671 621 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 PMLP29590 882 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 GPR19Q15760 415 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 CRY1Q16526 586 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 BRAPQ7Z569 592 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 PIP4K2CQ8TBX8 421 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 KCNJ15Q99712 375 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 YIPF4Q9BSR8 244 aa5.65□□□□□ -1.5
HDAC9-209ENST00000425071 CELF4Q9BZC1 486 aaKnown RBP5.65□□□□□ -1.5
HDAC9-209ENST00000425071 RXFP1Q9HBX9 757 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms