RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 NRBP1Q9UHY1 535 aa16.87■□□□□ 0.29
CALD1-206ENST00000424922 PNMA3Q9UL41 463 aa16.87■□□□□ 0.29
CALD1-206ENST00000424922 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
CALD1-206ENST00000424922 IGLV3-22A0A075B6J6 115 aa16.86■□□□□ 0.29
CALD1-206ENST00000424922 EIF2AK2P19525 551 aaKnown RBP16.86■□□□□ 0.29
CALD1-206ENST00000424922 ZNF157P51786 506 aaPredicted RBP16.86■□□□□ 0.29
CALD1-206ENST00000424922 DNTTIP2Q5QJE6 756 aaKnown RBP16.86■□□□□ 0.29
CALD1-206ENST00000424922 IL31RAQ8NI17 732 aa16.86■□□□□ 0.29
CALD1-206ENST00000424922 ETNPPLQ8TBG4 499 aa16.86■□□□□ 0.29
CALD1-206ENST00000424922 CYP39A1Q9NYL5 469 aa16.86■□□□□ 0.29
CALD1-206ENST00000424922 POTEMA6NI47 508 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 ACTN4O43707 911 aaKnown RBP16.85■□□□□ 0.29
CALD1-206ENST00000424922 KARSQ15046 597 aaKnown RBP16.85■□□□□ 0.29
CALD1-206ENST00000424922 SAPCD2Q86UD0 394 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 NCAPG2Q86XI2 1143 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 RASSF8Q8NHQ8 419 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
CALD1-206ENST00000424922 RAB34Q9BZG1 259 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 LRWD1Q9UFC0 647 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
CALD1-206ENST00000424922 RABGAP1Q9Y3P9 1069 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 A0A087WWV3 80 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 MSH4O15457 936 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 PDIA5Q14554 519 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 DHX8Q14562 1220 aaKnown RBP16.85■□□□□ 0.29
CALD1-206ENST00000424922 Q3C1V9 767 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 CEP55Q53EZ4 464 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 ARHGEF16Q5VV41 709 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 SLFN12Q8IYM2 578 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 C17orf53Q8N3J3 647 aaPredicted RBP16.85■□□□□ 0.29
CALD1-206ENST00000424922 SMCR8Q8TEV9 937 aaPredicted RBP16.85■□□□□ 0.29
CALD1-206ENST00000424922 CCSER1Q9C0I3 900 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 PXMP2Q9NR77 195 aa16.85■□□□□ 0.29
CALD1-206ENST00000424922 TBX3O15119 743 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 FOXN1O15353 648 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 PGM5Q15124 567 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 ANKRD23Q86SG2 305 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 CABP7Q86V35 215 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 RASAL3Q86YV0 1011 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 ANKRD35Q8N283 1001 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 IQUBQ8NA54 791 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 PLIN2Q99541 437 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 IMPACTQ9P2X3 320 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 FBXO40Q9UH90 709 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 SLC45A1Q9Y2W3 748 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 FRMPD4Q14CM0 1322 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 UQCRHLA0A096LP55 91 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 UQCRHP07919 91 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 ERCC3P19447 782 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 BRD2P25440 801 aaKnown RBP16.84■□□□□ 0.29
CALD1-206ENST00000424922 PNOCQ13519 176 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 NCAPHQ15003 741 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 E2F4Q16254 413 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 CCDC144BQ3MJ40 725 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 PCNX4Q63HM2 1172 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 MYRIPQ8NFW9 859 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 CACTINQ8WUQ7 758 aaKnown RBP16.84■□□□□ 0.29
CALD1-206ENST00000424922 FAM20AQ96MK3 541 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 PTPN18Q99952 460 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 MXRA8Q9BRK3 442 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 DISC1Q9NRI5 854 aa16.84■□□□□ 0.29
CALD1-206ENST00000424922 MEIS1O00470 390 aa16.83■□□□□ 0.28
CALD1-206ENST00000424922 SLFN14P0C7P3 912 aa16.83■□□□□ 0.28
CALD1-206ENST00000424922 MYCLP12524 364 aaPredicted RBP16.83■□□□□ 0.28
CALD1-206ENST00000424922 GSDMDP57764 484 aa16.83■□□□□ 0.28
CALD1-206ENST00000424922 MDM2Q00987 491 aaPredicted RBP16.83■□□□□ 0.28
CALD1-206ENST00000424922 RGMBQ6NW40 437 aa16.83■□□□□ 0.28
CALD1-206ENST00000424922 GRAMD1CQ8IYS0 662 aa16.83■□□□□ 0.28
CALD1-206ENST00000424922 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.28
CALD1-206ENST00000424922 PYM1Q9BRP8 204 aaKnown RBP16.83■□□□□ 0.28
CALD1-206ENST00000424922 MMTAG2Q9BU76 263 aaKnown RBP16.83■□□□□ 0.28
CALD1-206ENST00000424922 R3HDMLQ9H3Y0 253 aa16.83■□□□□ 0.28
CALD1-206ENST00000424922 SLC25A27O95847 323 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 ITGB5P18084 799 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 STAT6P42226 847 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 MRPS9P82933 396 aaKnown RBP16.82■□□□□ 0.28
CALD1-206ENST00000424922 RRAGBQ5VZM2 374 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 KANK3Q6NY19 840 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 LRRC8AQ8IWT6 810 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 MAF1Q9H063 256 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 PFASO15067 1338 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 BIN1O00499 593 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 ARP10275 920 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 ERVK-9P63128 1117 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 ERVK-24P63145 666 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
CALD1-206ENST00000424922 LRMPQ12912 555 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 NSUN6Q8TEA1 469 aaKnown RBP16.82■□□□□ 0.28
CALD1-206ENST00000424922 WDR11Q9BZH6 1224 aa16.82■□□□□ 0.28
CALD1-206ENST00000424922 DOCK5Q9H7D0 1870 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 AFMP43652 599 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 POSTNQ15063 836 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 KRT79Q5XKE5 535 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 PDXDC2PQ6P474 469 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 GTF3C2Q8WUA4 911 aaPredicted RBP16.81■□□□□ 0.28
CALD1-206ENST00000424922 CALML4Q96GE6 196 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 PAGE5Q96GU1 130 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms