RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 KIAA0753Q2KHM9 967 aa19.36■□□□□ 0.69
CCDC78-203ENST00000423653 MYSM1Q5VVJ2 828 aa19.36■□□□□ 0.69
CCDC78-203ENST00000423653 GDF6Q6KF10 455 aaPredicted RBP19.36■□□□□ 0.69
CCDC78-203ENST00000423653 GAS2L1Q99501 681 aaPredicted RBP19.36■□□□□ 0.69
CCDC78-203ENST00000423653 MLXIPQ9HAP2 919 aa19.36■□□□□ 0.69
CCDC78-203ENST00000423653 GBF1Q92538 1859 aa19.36■□□□□ 0.69
CCDC78-203ENST00000423653 SCN5AQ14524 2016 aa19.35■□□□□ 0.69
CCDC78-203ENST00000423653 PIK3CDO00329 1044 aa19.35■□□□□ 0.69
CCDC78-203ENST00000423653 PPFIA4O75335 1185 aa19.35■□□□□ 0.69
CCDC78-203ENST00000423653 CDC45O75419 566 aa19.35■□□□□ 0.69
CCDC78-203ENST00000423653 PLEKHA8P1O95397 391 aa19.35■□□□□ 0.69
CCDC78-203ENST00000423653 PARNO95453 639 aaKnown RBP19.35■□□□□ 0.69
CCDC78-203ENST00000423653 ATP2A2P16615 1042 aaKnown RBP19.35■□□□□ 0.69
CCDC78-203ENST00000423653 SYNE3Q6ZMZ3 975 aa19.35■□□□□ 0.69
CCDC78-203ENST00000423653 INPP4AQ96PE3 977 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-203ENST00000423653 FTOQ9C0B1 505 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCDC78-203ENST00000423653 SLC28A3Q9HAS3 691 aa19.35■□□□□ 0.69
CCDC78-203ENST00000423653 NOP56O00567 594 aaKnown RBP19.34■□□□□ 0.69
CCDC78-203ENST00000423653 FIBPO43427 364 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 RBL2Q08999 1139 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 NEDD9Q14511 834 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 HSDL1Q3SXM5 330 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 XRRA1Q6P2D8 792 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 SGMS1Q86VZ5 419 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 MICU3Q86XE3 530 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 SLC9A7Q96T83 725 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 ALG1Q9BT22 464 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 HDAC6Q9UBN7 1215 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 PCDHA11Q9Y5I1 949 aa19.34■□□□□ 0.69
CCDC78-203ENST00000423653 HAS3O00219 553 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 SORBS3O60504 671 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 BAIAP3O94812 1187 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 SELPP16109 830 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 RXRAP19793 462 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 KRT32Q14532 448 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 PCNX4Q63HM2 1172 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 TMTC3Q6ZXV5 915 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 LRRC8DQ7L1W4 858 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 SRBD1Q8N5C6 995 aaKnown RBP19.33■□□□□ 0.68
CCDC78-203ENST00000423653 VWCEQ96DN2 955 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 LRRC2Q9BYS8 371 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 NKX2-4Q9H2Z4 354 aa19.33■□□□□ 0.68
CCDC78-203ENST00000423653 ICAM3P32942 547 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 MRPS9P82933 396 aaKnown RBP19.32■□□□□ 0.68
CCDC78-203ENST00000423653 PTK7Q13308 1070 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 PPP2R2DQ66LE6 453 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 USP17L6PQ6QN14 398 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 METTL7BQ6UX53 244 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 FANCBQ8NB91 859 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 NEK1Q96PY6 1258 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 CTAGE1Q96RT6 745 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 RBM28Q9NW13 759 aaKnown RBP19.32■□□□□ 0.68
CCDC78-203ENST00000423653 YBX2Q9Y2T7 364 aaKnown RBP19.32■□□□□ 0.68
CCDC78-203ENST00000423653 EYSQ5T1H1 3165 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 UNC80Q8N2C7 3258 aa19.32■□□□□ 0.68
CCDC78-203ENST00000423653 MEIS2O14770 477 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 SP2Q02086 613 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 APOA5Q6Q788 366 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 NLRX1Q86UT6 975 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 SKAP1Q86WV1 359 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 PHOSPHO2Q8TCD6 241 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 DHX38Q92620 1227 aaKnown RBP19.31■□□□□ 0.68
CCDC78-203ENST00000423653 GPKOWQ92917 476 aaPredicted RBP eCLIP19.31■□□□□ 0.68
CCDC78-203ENST00000423653 CDHR1Q96JP9 859 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 PRDM12Q9H4Q4 367 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 PSTPIP2Q9H939 334 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 EHMT1Q9H9B1 1298 aa19.31■□□□□ 0.68
CCDC78-203ENST00000423653 SPATA31C2B4DYI2 1134 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 LGALS2P05162 132 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 HMGB1P09429 215 aaKnown RBP19.3■□□□□ 0.68
CCDC78-203ENST00000423653 CKBP12277 381 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 KCNJ6P48051 423 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 RABGGTBP53611 331 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 COL9A3Q14050 684 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-203ENST00000423653 HEATR3Q7Z4Q2 680 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 RAB11FIP4Q86YS3 637 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 CMTR1Q8N1G2 835 aaKnown RBP19.3■□□□□ 0.68
CCDC78-203ENST00000423653 GIMAP8Q8ND71 665 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-203ENST00000423653 ZFP91Q96JP5 570 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-203ENST00000423653 SENP7Q9BQF6 1050 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 USP26Q9BXU7 913 aa19.3■□□□□ 0.68
CCDC78-203ENST00000423653 ZNF215Q9UL58 517 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-203ENST00000423653 TRIP12Q14669 1992 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-203ENST00000423653 SPDYE3A6NKU9 549 aa19.29■□□□□ 0.68
CCDC78-203ENST00000423653 H3BRB1 525 aa19.29■□□□□ 0.68
CCDC78-203ENST00000423653 TSGA10IPQ3SY00 556 aa19.29■□□□□ 0.68
CCDC78-203ENST00000423653 DHX32Q7L7V1 743 aaKnown RBP19.29■□□□□ 0.68
CCDC78-203ENST00000423653 TEX2Q8IWB9 1127 aa19.29■□□□□ 0.68
CCDC78-203ENST00000423653 GPRASP2Q96D09 838 aa19.29■□□□□ 0.68
CCDC78-203ENST00000423653 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
CCDC78-203ENST00000423653 C16orf70Q9BSU1 422 aa19.29■□□□□ 0.68
CCDC78-203ENST00000423653 TUT1Q9H6E5 874 aaKnown RBP19.29■□□□□ 0.68
CCDC78-203ENST00000423653 RTEL1Q9NZ71 1219 aa19.29■□□□□ 0.68
CCDC78-203ENST00000423653 CNTNAP5Q8WYK1 1306 aa19.28■□□□□ 0.68
CCDC78-203ENST00000423653 A0A0C4DFX4 3053 aa19.28■□□□□ 0.68
CCDC78-203ENST00000423653 KIF28PB7ZC32 967 aa19.28■□□□□ 0.68
CCDC78-203ENST00000423653 ZBTB43O43298 467 aa19.28■□□□□ 0.68
CCDC78-203ENST00000423653 EFCAB14O75071 495 aa19.28■□□□□ 0.68
CCDC78-203ENST00000423653 SEMA3FQ13275 785 aa19.28■□□□□ 0.68
CCDC78-203ENST00000423653 RTN1Q16799 776 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms