RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 CATIPQ7Z7H3 387 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 VSIG10LQ86VR7 867 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 IL31RAQ8NI17 732 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 ATXN2LQ8WWM7 1075 aaKnown RBP20.03■□□□□ 0.8
PTCD1-202ENST00000419981 DHX38Q92620 1227 aaKnown RBP20.03■□□□□ 0.8
PTCD1-202ENST00000419981 TAF6LQ9Y6J9 622 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 PNMA6FA0A0J9YX94 578 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 KIF28PB7ZC32 967 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 HAS3O00219 553 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 GGPS1O95749 300 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 KCNJ6P48051 423 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 CELF3Q5SZQ8 465 aaKnown RBP20.02■□□□□ 0.8
PTCD1-202ENST00000419981 MYSM1Q5VVJ2 828 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 FCHSD1Q86WN1 690 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 HERC6Q8IVU3 1022 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 SPATA33Q96N06 139 aa20.02■□□□□ 0.8
PTCD1-202ENST00000419981 LOXHD1Q8IVV2 1947 aa20.02■□□□□ 0.79
PTCD1-202ENST00000419981 SORBS3O60504 671 aa20.01■□□□□ 0.79
PTCD1-202ENST00000419981 TGFB3P10600 412 aa20.01■□□□□ 0.79
PTCD1-202ENST00000419981 CKBP12277 381 aa20.01■□□□□ 0.79
PTCD1-202ENST00000419981 HOXD8P13378 290 aaPredicted RBP20.01■□□□□ 0.79
PTCD1-202ENST00000419981 UBA1P22314 1058 aaKnown RBP20.01■□□□□ 0.79
PTCD1-202ENST00000419981 ANTXR2P58335 489 aa20.01■□□□□ 0.79
PTCD1-202ENST00000419981 MAP4K1Q92918 833 aa20.01■□□□□ 0.79
PTCD1-202ENST00000419981 SPTBN5Q9NRC6 3674 aaKnown RBP20■□□□□ 0.79
PTCD1-202ENST00000419981 PPFIA4O75335 1185 aa20■□□□□ 0.79
PTCD1-202ENST00000419981 PTK7Q13308 1070 aa20■□□□□ 0.79
PTCD1-202ENST00000419981 HSDL1Q3SXM5 330 aa20■□□□□ 0.79
PTCD1-202ENST00000419981 CNKSR3Q6P9H4 555 aa20■□□□□ 0.79
PTCD1-202ENST00000419981 MB21D2Q8IYB1 491 aaPredicted RBP20■□□□□ 0.79
PTCD1-202ENST00000419981 MICALL1Q8N3F8 863 aa20■□□□□ 0.79
PTCD1-202ENST00000419981 IGDCC4Q8TDY8 1250 aa20■□□□□ 0.79
PTCD1-202ENST00000419981 TSPYL2Q9H2G4 693 aaPredicted RBP20■□□□□ 0.79
PTCD1-202ENST00000419981 RBM8AQ9Y5S9 174 aaKnown RBP20■□□□□ 0.79
PTCD1-202ENST00000419981 WDR5P61964 334 aaKnown RBP19.99■□□□□ 0.79
PTCD1-202ENST00000419981 SP2Q02086 613 aa19.99■□□□□ 0.79
PTCD1-202ENST00000419981 GPNMBQ14956 572 aa19.99■□□□□ 0.79
PTCD1-202ENST00000419981 PIBF1Q8WXW3 757 aa19.99■□□□□ 0.79
PTCD1-202ENST00000419981 GPKOWQ92917 476 aaPredicted RBP eCLIP19.99■□□□□ 0.79
PTCD1-202ENST00000419981 ZFP91Q96JP5 570 aaPredicted RBP19.99■□□□□ 0.79
PTCD1-202ENST00000419981 ASB2Q96Q27 587 aa19.99■□□□□ 0.79
PTCD1-202ENST00000419981 CERS4Q9HA82 394 aa19.99■□□□□ 0.79
PTCD1-202ENST00000419981 MLXIPQ9HAP2 919 aa19.99■□□□□ 0.79
PTCD1-202ENST00000419981 FRMPD4Q14CM0 1322 aa19.99■□□□□ 0.79
PTCD1-202ENST00000419981 RALGAPA2Q2PPJ7 1873 aa19.99■□□□□ 0.79
PTCD1-202ENST00000419981 TLL1O43897 1013 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 NBNO60934 754 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 CXCL10P02778 98 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 MRPS5P82675 430 aaKnown RBP19.98■□□□□ 0.79
PTCD1-202ENST00000419981 TAP1Q03518 808 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 GNPTABQ3T906 1256 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 CASC1Q6TDU7 716 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 ZNF654Q8IZM8 581 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 CTCFLQ8NI51 663 aaPredicted RBP19.98■□□□□ 0.79
PTCD1-202ENST00000419981 MAP3K14Q99558 947 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 SPZ1Q9BXG8 430 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 LY9Q9HBG7 655 aa19.98■□□□□ 0.79
PTCD1-202ENST00000419981 RFXAPO00287 272 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 GTPBP6O43824 516 aaPredicted RBP19.97■□□□□ 0.79
PTCD1-202ENST00000419981 STAM2O75886 525 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 DDAH1O94760 285 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 KIF5BP33176 963 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 ZNF200P98182 395 aaPredicted RBP19.97■□□□□ 0.79
PTCD1-202ENST00000419981 ZNF618Q5T7W0 954 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 ARNTL2Q8WYA1 636 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 RRP36Q96EU6 259 aaKnown RBP19.97■□□□□ 0.79
PTCD1-202ENST00000419981 C16orf70Q9BSU1 422 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 MTA3Q9BTC8 594 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 MYL10Q9BUA6 226 aa19.97■□□□□ 0.79
PTCD1-202ENST00000419981 ABHD14A-ACY1A0A1B0GW23 586 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 EPOPA6NHQ4 379 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 NOP56O00567 594 aaKnown RBP19.96■□□□□ 0.79
PTCD1-202ENST00000419981 ARHGEF15O94989 841 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 MRPS9P82933 396 aaKnown RBP19.96■□□□□ 0.79
PTCD1-202ENST00000419981 TRIM71Q2Q1W2 868 aaKnown RBP19.96■□□□□ 0.79
PTCD1-202ENST00000419981 IL27Q8NEV9 243 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 SMARCC2Q8TAQ2 1214 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 CUL5Q93034 780 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 WNT8BQ93098 351 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 ZBED2Q9BTP6 218 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 SEC63Q9UGP8 760 aaKnown RBP19.96■□□□□ 0.79
PTCD1-202ENST00000419981 MTCH2Q9Y6C9 303 aa19.96■□□□□ 0.79
PTCD1-202ENST00000419981 H3BRB1 525 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 TNFRSF10AO00220 468 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 PRC1O43663 620 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 EFCAB14O75071 495 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 LGALS2P05162 132 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 POU3F3P20264 500 aaPredicted RBP19.95■□□□□ 0.78
PTCD1-202ENST00000419981 ICAM3P32942 547 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 DEFB103AP81534 67 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 NEDD9Q14511 834 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 HIC1Q14526 733 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 INPP4AQ96PE3 977 aaPredicted RBP19.95■□□□□ 0.78
PTCD1-202ENST00000419981 TUT1Q9H6E5 874 aaKnown RBP19.95■□□□□ 0.78
PTCD1-202ENST00000419981 EMSYQ7Z589 1322 aa19.95■□□□□ 0.78
PTCD1-202ENST00000419981 TTC28Q96AY4 2481 aa19.94■□□□□ 0.78
PTCD1-202ENST00000419981 C17orf102A2RUQ5 167 aa19.94■□□□□ 0.78
PTCD1-202ENST00000419981 SMARCA1P28370 1054 aa19.94■□□□□ 0.78
PTCD1-202ENST00000419981 MCM5P33992 734 aa19.94■□□□□ 0.78
PTCD1-202ENST00000419981 IKBKEQ14164 716 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms