RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 STK36Q9NRP7 1315 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 H0Y3Z8 333 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 PRPF3O43395 683 aaKnown RBP12.83□□□□□ -0.36
DDR1-232ENST00000418800 PDE8AO60658 829 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 CCNE1P24864 410 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 SFMBT2Q5VUG0 894 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 ANKRD42Q8N9B4 389 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 MTMR8Q96EF0 704 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 KCNK9Q9NPC2 374 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
DDR1-232ENST00000418800 ARHGAP20Q9P2F6 1191 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 ITIH6Q6UXX5 1313 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
DDR1-232ENST00000418800 CACNA1FO60840 1977 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 USP17L3A6NCW0 530 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 USP17L4A6NCW7 530 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 EVI5O60447 810 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 DHX9Q08211 1270 aaKnown RBP12.82□□□□□ -0.36
DDR1-232ENST00000418800 RUFY4Q6ZNE9 571 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 USP17L1Q7RTZ2 530 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 LMBR1Q8WVP7 490 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 RBM28Q9NW13 759 aaKnown RBP12.82□□□□□ -0.36
DDR1-232ENST00000418800 NIP7Q9Y221 180 aaKnown RBP eCLIP12.82□□□□□ -0.36
DDR1-232ENST00000418800 CCDC189A1A4V9 331 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 COPB2P35606 906 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.36
DDR1-232ENST00000418800 PRCCQ92733 491 aaPredicted RBP12.82□□□□□ -0.36
DDR1-232ENST00000418800 OSBPL7Q9BZF2 842 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 SEC63Q9UGP8 760 aaKnown RBP12.82□□□□□ -0.36
DDR1-232ENST00000418800 HMGB1P1B2RPK0 211 aaPredicted RBP12.82□□□□□ -0.36
DDR1-232ENST00000418800 SRGNP10124 158 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 LRRC14Q15048 493 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 IL17AQ16552 155 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 MSL3Q8N5Y2 521 aaKnown RBP12.82□□□□□ -0.36
DDR1-232ENST00000418800 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 KLHL29Q96CT2 875 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
DDR1-232ENST00000418800 ZNF263O14978 683 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 IRX1P78414 480 aaPredicted RBP12.81□□□□□ -0.36
DDR1-232ENST00000418800 MXRA7P84157 204 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 CCDC38Q502W7 563 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 OTUD6AQ7L8S5 288 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 ADGRA1Q86SQ6 560 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 PNMA1Q8ND90 353 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 CASKIN2Q8WXE0 1202 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 ANO9A1A5B4 782 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 CALM1P0DP23 149 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 CALM2P0DP24 149 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 CALM3P0DP25 149 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
DDR1-232ENST00000418800 POLE2P56282 527 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 TAF11Q15544 211 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 PDXDC2PQ6P474 469 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 CNNM4Q6P4Q7 775 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 KDM7AQ6ZMT4 941 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 TMTC3Q6ZXV5 915 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 SNX29Q8TEQ0 813 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 LRRC45Q96CN5 670 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 DNAJC7Q99615 494 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 PACSIN1Q9BY11 444 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 SH2D4AQ9H788 454 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 AMACRQ9UHK6 382 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 FBXL5Q9UKA1 691 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 DAPK3O43293 454 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 RAD51CO43502 376 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 ANKRD20A8PQ5CZ79 823 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 ZFYVE27Q5T4F4 411 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 SLC44A5Q8NCS7 719 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
DDR1-232ENST00000418800 THAP9Q9H5L6 903 aa12.81□□□□□ -0.36
DDR1-232ENST00000418800 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.81□□□□□ -0.36
DDR1-232ENST00000418800 WDR19Q8NEZ3 1342 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 CAND2O75155 1236 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 KLRC1P26715 233 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 SSR1P43307 286 aaKnown RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 VWA3BQ502W6 1294 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 HERC4Q5GLZ8 1057 aaPredicted RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 GIGYF2Q6Y7W6 1299 aaKnown RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 RAPGEF5Q92565 580 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 CUL5Q93034 780 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 FAXDC2Q96IV6 333 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 SALL4Q9UJQ4 1053 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 FGFR1OPO95684 399 aaKnown RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 UBE4AQ14139 1066 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 FAM47EQ6ZV65 393 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 CRNKL1Q9BZJ0 848 aaKnown RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 FAM205AQ6ZU69 1335 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 POTEMA6NI47 508 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 MMEP08473 750 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms