RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 IL31RAQ8NI17 732 aa21.26■□□□□ 0.99
VPS16-204ENST00000417508 PHOSPHO2Q8TCD6 241 aa21.26■□□□□ 0.99
VPS16-204ENST00000417508 MYL10Q9BUA6 226 aa21.26■□□□□ 0.99
VPS16-204ENST00000417508 MLXIPQ9HAP2 919 aa21.26■□□□□ 0.99
VPS16-204ENST00000417508 SLC28A3Q9HAS3 691 aa21.26■□□□□ 0.99
VPS16-204ENST00000417508 PCDHA11Q9Y5I1 949 aa21.26■□□□□ 0.99
VPS16-204ENST00000417508 SLC12A7Q9Y666 1083 aa21.26■□□□□ 0.99
VPS16-204ENST00000417508 ZBBXA8MT70 800 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 RBL2Q08999 1139 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 NEDD9Q14511 834 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 SCN5AQ14524 2016 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 MFSD10Q14728 455 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 KIAA0753Q2KHM9 967 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 SGMS1Q86VZ5 419 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 SRBD1Q8N5C6 995 aaKnown RBP21.25■□□□□ 0.99
VPS16-204ENST00000417508 SMARCC2Q8TAQ2 1214 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 PPP1R13LQ8WUF5 828 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 PIBF1Q8WXW3 757 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 INPP4AQ96PE3 977 aaPredicted RBP21.25■□□□□ 0.99
VPS16-204ENST00000417508 GAS2L1Q99501 681 aaPredicted RBP21.25■□□□□ 0.99
VPS16-204ENST00000417508 HDAC6Q9UBN7 1215 aa21.25■□□□□ 0.99
VPS16-204ENST00000417508 ATP2A2P16615 1042 aaKnown RBP21.24■□□□□ 0.99
VPS16-204ENST00000417508 UBA1P22314 1058 aaKnown RBP21.24■□□□□ 0.99
VPS16-204ENST00000417508 SP2Q02086 613 aa21.24■□□□□ 0.99
VPS16-204ENST00000417508 PTK7Q13308 1070 aa21.24■□□□□ 0.99
VPS16-204ENST00000417508 HSDL1Q3SXM5 330 aa21.24■□□□□ 0.99
VPS16-204ENST00000417508 TSGA10IPQ3SY00 556 aa21.24■□□□□ 0.99
VPS16-204ENST00000417508 SYNE3Q6ZMZ3 975 aa21.24■□□□□ 0.99
VPS16-204ENST00000417508 FANCBQ8NB91 859 aa21.24■□□□□ 0.99
VPS16-204ENST00000417508 CTAGE1Q96RT6 745 aa21.24■□□□□ 0.99
VPS16-204ENST00000417508 ALG1Q9BT22 464 aa21.24■□□□□ 0.99
VPS16-204ENST00000417508 FTOQ9C0B1 505 aaKnown RBP eCLIP21.24■□□□□ 0.99
VPS16-204ENST00000417508 SPATA31C2B4DYI2 1134 aa21.23■□□□□ 0.99
VPS16-204ENST00000417508 SELPP16109 830 aa21.23■□□□□ 0.99
VPS16-204ENST00000417508 MRPS9P82933 396 aaKnown RBP21.23■□□□□ 0.99
VPS16-204ENST00000417508 PCNX4Q63HM2 1172 aa21.23■□□□□ 0.99
VPS16-204ENST00000417508 SLC9A7Q96T83 725 aa21.23■□□□□ 0.99
VPS16-204ENST00000417508 TET1Q8NFU7 2136 aa21.23■□□□□ 0.99
VPS16-204ENST00000417508 MEIS2O14770 477 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 FIBPO43427 364 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 BAIAP3O94812 1187 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 USP17L6PQ6QN14 398 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 NEK1Q96PY6 1258 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 SENP7Q9BQF6 1050 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 USP26Q9BXU7 913 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 NKX2-4Q9H2Z4 354 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 PSTPIP2Q9H939 334 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 A0A0C4DFX4 3053 aa21.22■□□□□ 0.99
VPS16-204ENST00000417508 PLEKHA8P1O95397 391 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 ZNF286BP0CG31 522 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 KRT32Q14532 448 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 METTL7BQ6UX53 244 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 LRRC8DQ7L1W4 858 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 NLRX1Q86UT6 975 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 TEX2Q8IWB9 1127 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 GIMAP8Q8ND71 665 aaPredicted RBP21.21■□□□□ 0.99
VPS16-204ENST00000417508 C16orf70Q9BSU1 422 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 YBX2Q9Y2T7 364 aaKnown RBP21.21■□□□□ 0.99
VPS16-204ENST00000417508 GBF1Q92538 1859 aa21.21■□□□□ 0.99
VPS16-204ENST00000417508 TANC1Q9C0D5 1861 aa21.2■□□□□ 0.98
VPS16-204ENST00000417508 H3BRB1 525 aa21.2■□□□□ 0.98
VPS16-204ENST00000417508 NOP56O00567 594 aaKnown RBP21.2■□□□□ 0.98
VPS16-204ENST00000417508 CDC45O75419 566 aa21.2■□□□□ 0.98
VPS16-204ENST00000417508 CKBP12277 381 aa21.2■□□□□ 0.98
VPS16-204ENST00000417508 EXOSC10Q01780 885 aaKnown RBP21.2■□□□□ 0.98
VPS16-204ENST00000417508 TMTC3Q6ZXV5 915 aa21.2■□□□□ 0.98
VPS16-204ENST00000417508 DHX32Q7L7V1 743 aaKnown RBP21.2■□□□□ 0.98
VPS16-204ENST00000417508 DHX38Q92620 1227 aaKnown RBP21.2■□□□□ 0.98
VPS16-204ENST00000417508 GPKOWQ92917 476 aaPredicted RBP eCLIP21.2■□□□□ 0.98
VPS16-204ENST00000417508 ZFP91Q96JP5 570 aaPredicted RBP21.2■□□□□ 0.98
VPS16-204ENST00000417508 PRDM12Q9H4Q4 367 aa21.2■□□□□ 0.98
VPS16-204ENST00000417508 TUT1Q9H6E5 874 aaKnown RBP21.2■□□□□ 0.98
VPS16-204ENST00000417508 RBM28Q9NW13 759 aaKnown RBP21.2■□□□□ 0.98
VPS16-204ENST00000417508 RTEL1Q9NZ71 1219 aa21.2■□□□□ 0.98
VPS16-204ENST00000417508 KIF28PB7ZC32 967 aa21.19■□□□□ 0.98
VPS16-204ENST00000417508 CXCL10P02778 98 aa21.19■□□□□ 0.98
VPS16-204ENST00000417508 HMGB1P09429 215 aaKnown RBP21.19■□□□□ 0.98
VPS16-204ENST00000417508 RABGGTBP53611 331 aa21.19■□□□□ 0.98
VPS16-204ENST00000417508 CDHR1Q96JP9 859 aa21.19■□□□□ 0.98
VPS16-204ENST00000417508 LRRC2Q9BYS8 371 aa21.19■□□□□ 0.98
VPS16-204ENST00000417508 RXRAP19793 462 aa21.18■□□□□ 0.98
VPS16-204ENST00000417508 SEMA3FQ13275 785 aa21.18■□□□□ 0.98
VPS16-204ENST00000417508 COL9A3Q14050 684 aaPredicted RBP21.18■□□□□ 0.98
VPS16-204ENST00000417508 CYFIP1Q7L576 1253 aa21.18■□□□□ 0.98
VPS16-204ENST00000417508 CMTR1Q8N1G2 835 aaKnown RBP21.18■□□□□ 0.98
VPS16-204ENST00000417508 GPRASP2Q96D09 838 aa21.18■□□□□ 0.98
VPS16-204ENST00000417508 MAFGO15525 162 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 SORBS3O60504 671 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 EFCAB14O75071 495 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 LGALS2P05162 132 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 GNAT1P11488 350 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 KCNJ6P48051 423 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 GPNMBQ14956 572 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 TRIM71Q2Q1W2 868 aaKnown RBP21.17■□□□□ 0.98
VPS16-204ENST00000417508 PPP2R2DQ66LE6 453 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 CNKSR3Q6P9H4 555 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 APOA5Q6Q788 366 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 SERINC5Q86VE9 423 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 MICU3Q86XE3 530 aa21.17■□□□□ 0.98
VPS16-204ENST00000417508 CCDC82Q8N4S0 544 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms