RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 STAM2O75886 525 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 GRIN2CQ14957 1233 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 TMTC3Q6ZXV5 915 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 RETREG2Q8NC44 543 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 SMARCC2Q8TAQ2 1214 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 KCNB2Q92953 911 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 TIFAQ96CG3 184 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 SPATA33Q96N06 139 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 INPP4AQ96PE3 977 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-210ENST00000416778 ZNF576Q9H609 170 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 PSTPIP2Q9H939 334 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 BRPF3Q9ULD4 1205 aa20.61■□□□□ 0.89
CPNE1-210ENST00000416778 hCG_1642624A0A1W2PR95 340 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 SORBS3O60504 671 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 F2P00734 622 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 UBA1P22314 1058 aaKnown RBP20.6■□□□□ 0.89
CPNE1-210ENST00000416778 SEMA3FQ13275 785 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 BFSP2Q13515 415 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 MFSD10Q14728 455 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 KIAA0753Q2KHM9 967 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 SYNE3Q6ZMZ3 975 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 MYLIPQ8WY64 445 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 CUL5Q93034 780 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 TCEANC2Q96MN5 208 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 C16orf70Q9BSU1 422 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 ALG1Q9BT22 464 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 MLXIPQ9HAP2 919 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 GTF2IRD1Q9UHL9 959 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 KIAA1217Q5T5P2 1943 aa20.6■□□□□ 0.89
CPNE1-210ENST00000416778 PFKMP08237 780 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 RFC2P35250 354 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 GPNMBQ14956 572 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 GNPTABQ3T906 1256 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 PCNX4Q63HM2 1172 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 XRRA1Q6P2D8 792 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 APOA5Q6Q788 366 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 DEFB128Q7Z7B8 93 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 C7orf31Q8N865 590 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 KATNAL1Q9BW62 490 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 MTIF3Q9H2K0 278 aaKnown RBP20.59■□□□□ 0.89
CPNE1-210ENST00000416778 NOD1Q9Y239 953 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 CDH23Q9H251 3354 aa20.59■□□□□ 0.89
CPNE1-210ENST00000416778 ZNF286BP0CG31 522 aa20.58■□□□□ 0.89
CPNE1-210ENST00000416778 FUT2Q10981 343 aa20.58■□□□□ 0.89
CPNE1-210ENST00000416778 HIC1Q14526 733 aa20.58■□□□□ 0.89
CPNE1-210ENST00000416778 KRT32Q14532 448 aa20.58■□□□□ 0.89
CPNE1-210ENST00000416778 MICU3Q86XE3 530 aa20.58■□□□□ 0.89
CPNE1-210ENST00000416778 DHX38Q92620 1227 aaKnown RBP20.58■□□□□ 0.89
CPNE1-210ENST00000416778 FAM217BQ9NTX9 383 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-210ENST00000416778 SLC4A7Q9Y6M7 1214 aa20.58■□□□□ 0.89
CPNE1-210ENST00000416778 CHD9Q3L8U1 2897 aa20.58■□□□□ 0.88
CPNE1-210ENST00000416778 ZNF200P98182 395 aaPredicted RBP20.57■□□□□ 0.88
CPNE1-210ENST00000416778 NEDD9Q14511 834 aa20.57■□□□□ 0.88
CPNE1-210ENST00000416778 CAGE1Q8TC20 777 aa20.57■□□□□ 0.88
CPNE1-210ENST00000416778 MSRAQ9UJ68 235 aa20.57■□□□□ 0.88
CPNE1-210ENST00000416778 ZBTB43O43298 467 aa20.56■□□□□ 0.88
CPNE1-210ENST00000416778 FIBPO43427 364 aa20.56■□□□□ 0.88
CPNE1-210ENST00000416778 HMGB1P09429 215 aaKnown RBP20.56■□□□□ 0.88
CPNE1-210ENST00000416778 RBL2Q08999 1139 aa20.56■□□□□ 0.88
CPNE1-210ENST00000416778 CYFIP1Q7L576 1253 aa20.56■□□□□ 0.88
CPNE1-210ENST00000416778 AFAP1L1Q8TED9 768 aa20.56■□□□□ 0.88
CPNE1-210ENST00000416778 SENP7Q9BQF6 1050 aa20.56■□□□□ 0.88
CPNE1-210ENST00000416778 RBM28Q9NW13 759 aaKnown RBP20.56■□□□□ 0.88
CPNE1-210ENST00000416778 TELO2Q9Y4R8 837 aa20.56■□□□□ 0.88
CPNE1-210ENST00000416778 V9GY48 417 aaPredicted RBP20.56■□□□□ 0.88
CPNE1-210ENST00000416778 H3BRB1 525 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 SELPP16109 830 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 HSPA4P34932 840 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 RABGGTBP53611 331 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 PTK7Q13308 1070 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 RAB30Q15771 203 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 TRIM71Q2Q1W2 868 aaKnown RBP20.55■□□□□ 0.88
CPNE1-210ENST00000416778 METTL7BQ6UX53 244 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 GPR20Q99678 358 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 USP26Q9BXU7 913 aa20.55■□□□□ 0.88
CPNE1-210ENST00000416778 TUT1Q9H6E5 874 aaKnown RBP20.55■□□□□ 0.88
CPNE1-210ENST00000416778 YBX2Q9Y2T7 364 aaKnown RBP20.55■□□□□ 0.88
CPNE1-210ENST00000416778 ZBBXA8MT70 800 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 ATP9AO75110 1047 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 CKBP12277 381 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 CPA1P15085 419 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 ITGB5P18084 799 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 CDC27P30260 824 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 UBE2SQ16763 222 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 RTN1Q16799 776 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 NLRX1Q86UT6 975 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 CCDC155Q8N6L0 562 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 FTOQ9C0B1 505 aaKnown RBP eCLIP20.54■□□□□ 0.885e-10■□□□□ 9.7
CPNE1-210ENST00000416778 PCDHA6Q9UN73 950 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 PCDHA8Q9Y5H6 950 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 SNX14Q9Y5W7 946 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 MYH7BA7E2Y1 1941 aa20.54■□□□□ 0.88
CPNE1-210ENST00000416778 KLF18A0A0U1RQI7 1052 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 LGALS2P05162 132 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 ACTN1P12814 892 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 FOSL2P15408 326 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 ATP2A2P16615 1042 aaKnown RBP20.53■□□□□ 0.88
CPNE1-210ENST00000416778 WWC2Q6AWC2 1192 aa20.53■□□□□ 0.88
CPNE1-210ENST00000416778 TYW1BQ6NUM6 668 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms