RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 CIITAP33076 1130 aa17.59■□□□□ 0.41
CRAT-203ENST00000415948 BEX3Q00994 111 aa17.59■□□□□ 0.41
CRAT-203ENST00000415948 NONOQ15233 471 aaKnown RBP eCLIP17.59■□□□□ 0.41
CRAT-203ENST00000415948 KRT25Q7Z3Z0 450 aa17.59■□□□□ 0.41
CRAT-203ENST00000415948 TLK2Q86UE8 772 aa17.59■□□□□ 0.41
CRAT-203ENST00000415948 SCFD2Q8WU76 684 aa17.59■□□□□ 0.41
CRAT-203ENST00000415948 MBOAT7Q96N66 472 aa17.59■□□□□ 0.41
CRAT-203ENST00000415948 JADE2Q9NQC1 790 aa17.59■□□□□ 0.41
CRAT-203ENST00000415948 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
CRAT-203ENST00000415948 MEIS1O00470 390 aa17.58■□□□□ 0.4
CRAT-203ENST00000415948 DUSP11O75319 330 aaKnown RBP17.58■□□□□ 0.4
CRAT-203ENST00000415948 XBP1P17861 261 aa17.58■□□□□ 0.4
CRAT-203ENST00000415948 SYT1P21579 422 aa17.58■□□□□ 0.4
CRAT-203ENST00000415948 TOB1P50616 345 aaPredicted RBP17.58■□□□□ 0.4
CRAT-203ENST00000415948 LRRC41Q15345 812 aa17.58■□□□□ 0.4
CRAT-203ENST00000415948 CEP55Q53EZ4 464 aa17.58■□□□□ 0.4
CRAT-203ENST00000415948 CCSAPQ6IQ19 270 aaPredicted RBP17.58■□□□□ 0.4
CRAT-203ENST00000415948 UBE2Q1Q7Z7E8 422 aa17.58■□□□□ 0.4
CRAT-203ENST00000415948 KLHDC9Q8NEP7 349 aa17.58■□□□□ 0.4
CRAT-203ENST00000415948 XPNPEP3Q9NQH7 507 aa17.58■□□□□ 0.4
CRAT-203ENST00000415948 CCDC194A0A1B0GVG4 234 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 RBAK-RBAKDNI3L0D1 243 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 RARBP10826 455 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
CRAT-203ENST00000415948 TRIM29Q14134 588 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 LARP1BQ659C4 914 aaKnown RBP17.57■□□□□ 0.4
CRAT-203ENST00000415948 IQSEC1Q6DN90 963 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 XRRA1Q6P2D8 792 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 GPRASP2Q96D09 838 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 KCNH7Q9NS40 1196 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 PCDH10Q9P2E7 1040 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 MTMR6Q9Y217 621 aa17.57■□□□□ 0.4
CRAT-203ENST00000415948 CYP3A7-CYP3A51PA0A087WV96 503 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 DHX15O43143 795 aaKnown RBP17.56■□□□□ 0.4
CRAT-203ENST00000415948 DYNC1LI2O43237 492 aaPredicted RBP17.56■□□□□ 0.4
CRAT-203ENST00000415948 FIBPO43427 364 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 GGPS1O95749 300 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 CYP3A7P24462 503 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 GJA9P57773 515 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 NKX3-2P78367 333 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 MTMR1Q13613 665 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 TTLL4Q14679 1199 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 LETM2Q2VYF4 491 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 PRR16Q569H4 304 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 FERMT3Q86UX7 667 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 PLA2G4DQ86XP0 818 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 PPP1R13LQ8WUF5 828 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 FOXP1Q9H334 677 aaPredicted RBP17.56■□□□□ 0.4
CRAT-203ENST00000415948 EHMT1Q9H9B1 1298 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 AGO4Q9HCK5 861 aaKnown RBP17.56■□□□□ 0.4
CRAT-203ENST00000415948 SCN10AQ9Y5Y9 1956 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 DNAH12Q6ZR08 3092 aa17.56■□□□□ 0.4
CRAT-203ENST00000415948 VPS37CA5D8V6 355 aaPredicted RBP17.55■□□□□ 0.4
CRAT-203ENST00000415948 B4DLN1 442 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 MSH4O15457 936 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 STAM2O75886 525 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 FARP2O94887 1054 aaPredicted RBP17.55■□□□□ 0.4
CRAT-203ENST00000415948 RESTQ13127 1097 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 HSDL1Q3SXM5 330 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 CELF3Q5SZQ8 465 aaKnown RBP17.55■□□□□ 0.4
CRAT-203ENST00000415948 MYSM1Q5VVJ2 828 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 FAM173BQ6P4H8 233 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 NEK8Q86SG6 692 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 POTEDQ86YR6 584 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 ETNPPLQ8TBG4 499 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 AFG1LQ8WV93 481 aa17.55■□□□□ 0.4
CRAT-203ENST00000415948 MPHOSPH6Q99547 160 aaKnown RBP17.55■□□□□ 0.4
CRAT-203ENST00000415948 CCNE2O96020 404 aa17.54■□□□□ 0.4
CRAT-203ENST00000415948 C6orf222P0C671 652 aaPredicted RBP17.54■□□□□ 0.4
CRAT-203ENST00000415948 USP11P51784 963 aa17.54■□□□□ 0.4
CRAT-203ENST00000415948 MCTP2Q6DN12 878 aa17.54■□□□□ 0.4
CRAT-203ENST00000415948 CYFIP1Q7L576 1253 aa17.54■□□□□ 0.4
CRAT-203ENST00000415948 TMEM106CQ9BVX2 250 aa17.54■□□□□ 0.4
CRAT-203ENST00000415948 TMEM60Q9H2L4 133 aa17.54■□□□□ 0.4
CRAT-203ENST00000415948 BRMS1Q9HCU9 246 aa17.54■□□□□ 0.4
CRAT-203ENST00000415948 MSCO60682 206 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 CAPN15O75808 1086 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 GH1P01241 217 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 TFRCP02786 760 aaKnown RBP17.53■□□□□ 0.4
CRAT-203ENST00000415948 MYCNP04198 464 aaPredicted RBP17.53■□□□□ 0.4
CRAT-203ENST00000415948 MMP3P08254 477 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 COL6A1P12109 1028 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 ATP2B1P20020 1258 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 CST5P28325 142 aaPredicted RBP17.53■□□□□ 0.4
CRAT-203ENST00000415948 ZNF76P36508 570 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 SP4Q02446 784 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 FSCN1Q16658 493 aaKnown RBP17.53■□□□□ 0.4
CRAT-203ENST00000415948 GNPTABQ3T906 1256 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 Q4G0T1 1027 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 MCTP1Q6DN14 999 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 NIPA1Q7RTP0 329 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 HAS1Q92839 578 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 CHAMP1Q96JM3 812 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 FTOQ9C0B1 505 aaKnown RBP eCLIP17.53■□□□□ 0.4
CRAT-203ENST00000415948 ZDHHC9Q9Y397 364 aa17.53■□□□□ 0.4
CRAT-203ENST00000415948 H3BQV1 296 aa17.52■□□□□ 0.4
CRAT-203ENST00000415948 DDX39AO00148 427 aaKnown RBP17.52■□□□□ 0.4
CRAT-203ENST00000415948 STX6O43752 255 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms