RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CIITAP33076 1130 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 EARS2Q5JPH6 523 aaKnown RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 FBXO46Q6PJ61 603 aaPredicted RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 IL31RAQ8NI17 732 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 VTA1Q9NP79 307 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 LCTP09848 1927 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 DOCK3Q8IZD9 2030 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 SNAI1O95863 264 aaPredicted RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 TPM3P06753 285 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 ZNF76P36508 570 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 GNPTABQ3T906 1256 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 RILPL1Q5EBL4 403 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 DNTTIP2Q5QJE6 756 aaKnown RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 UTP14CQ5TAP6 766 aaKnown RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 FOXD4L5Q5VV16 416 aaPredicted RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 NLRX1Q86UT6 975 aa16.44■□□□□ 0.22
SGCE-202ENST00000415788 FOXD4L4Q8WXT5 416 aaPredicted RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 INPP4AQ96PE3 977 aaPredicted RBP16.44■□□□□ 0.22
SGCE-202ENST00000415788 ZNFX1Q9P2E3 1918 aaKnown RBP16.43■□□□□ 0.22
SGCE-202ENST00000415788 ELNP15502 786 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
SGCE-202ENST00000415788 RESTQ13127 1097 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 NOLC1Q14978 699 aaKnown RBP eCLIP16.43■□□□□ 0.22
SGCE-202ENST00000415788 CEP55Q53EZ4 464 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 PPP4R3AQ6IN85 833 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 NIPA1Q7RTP0 329 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 FERMT3Q86UX7 667 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 CDHR1Q96JP9 859 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 SPTLC3Q9NUV7 552 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 UBIAD1Q9Y5Z9 338 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 PCNTO95613 3336 aa16.43■□□□□ 0.22
SGCE-202ENST00000415788 CYP3A7-CYP3A51PA0A087WV96 503 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 FAM205CA6NFA0 338 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 MAFGO15525 162 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 F13A1P00488 732 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 CYP3A7P24462 503 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 CYP2C19P33261 490 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 SETQ01105 290 aaPredicted RBP16.42■□□□□ 0.22
SGCE-202ENST00000415788 ORC2Q13416 577 aaPredicted RBP16.42■□□□□ 0.22
SGCE-202ENST00000415788 ACVR2BQ13705 512 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 LETM2Q2VYF4 491 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 KCNV1Q6PIU1 500 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 CHAMP1Q96JM3 812 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 MXRA8Q9BRK3 442 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 PLXNA1Q9UIW2 1896 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 KATNBL1Q9H079 304 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 JADE2Q9NQC1 790 aa16.42■□□□□ 0.22
SGCE-202ENST00000415788 MEIS1O00470 390 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 FIBPO43427 364 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 TGFB3P10600 412 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 ITGB5P18084 799 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 MTMR1Q13613 665 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 MYSM1Q5VVJ2 828 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 EEPD1Q7L9B9 569 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 FBXO16Q8IX29 292 aaPredicted RBP16.41■□□□□ 0.22
SGCE-202ENST00000415788 SCFD2Q8WU76 684 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 RTEL1Q9NZ71 1219 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
SGCE-202ENST00000415788 FAM86B1E9PN63 330 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
SGCE-202ENST00000415788 FAM86B2P0C5J1 330 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 CYBAP13498 195 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 PRKAR2AP13861 404 aaKnown RBP16.4■□□□□ 0.22
SGCE-202ENST00000415788 ICAM3P32942 547 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 UBE2HP62256 183 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 Q4G0T1 1027 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 TTC38Q5R3I4 469 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 MBOAT7Q96N66 472 aa16.4■□□□□ 0.22
SGCE-202ENST00000415788 DDX25Q9UHL0 483 aaKnown RBP16.4■□□□□ 0.22
SGCE-202ENST00000415788 ZHX1Q9UKY1 873 aaPredicted RBP16.4■□□□□ 0.22
SGCE-202ENST00000415788 IGLV3-22A0A075B6J6 115 aa16.39■□□□□ 0.22
SGCE-202ENST00000415788 RBM47A0AV96 593 aaKnown RBP16.39■□□□□ 0.22
SGCE-202ENST00000415788 EDIL3O43854 480 aa16.39■□□□□ 0.22
SGCE-202ENST00000415788 RGS20O76081 388 aa16.39■□□□□ 0.22
SGCE-202ENST00000415788 INHAP05111 366 aa16.39■□□□□ 0.22
SGCE-202ENST00000415788 ZNF865P0CJ78 1059 aaPredicted RBP16.39■□□□□ 0.22
SGCE-202ENST00000415788 CACNB2Q08289 660 aaPredicted RBP16.39■□□□□ 0.22
SGCE-202ENST00000415788 TTLL4Q14679 1199 aa16.39■□□□□ 0.22
SGCE-202ENST00000415788 PRR16Q569H4 304 aa16.39■□□□□ 0.22
SGCE-202ENST00000415788 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.22
SGCE-202ENST00000415788 PLA2G4DQ86XP0 818 aa16.39■□□□□ 0.22
SGCE-202ENST00000415788 TCHHQ07283 1943 aa16.39■□□□□ 0.21
SGCE-202ENST00000415788 GADD45BO75293 160 aaPredicted RBP16.39■□□□□ 0.21
SGCE-202ENST00000415788 TDP2O95551 362 aa16.39■□□□□ 0.21
SGCE-202ENST00000415788 ADCY5O95622 1261 aa16.39■□□□□ 0.21
SGCE-202ENST00000415788 IQSEC1Q6DN90 963 aa16.39■□□□□ 0.21
SGCE-202ENST00000415788 TAPT1Q6NXT6 567 aa16.39■□□□□ 0.21
SGCE-202ENST00000415788 KCNH7Q9NS40 1196 aa16.39■□□□□ 0.21
SGCE-202ENST00000415788 FAM184BQ9ULE4 1060 aa16.39■□□□□ 0.21
SGCE-202ENST00000415788 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
SGCE-202ENST00000415788 SPATA31C2B4DYI2 1134 aa16.38■□□□□ 0.21
SGCE-202ENST00000415788 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
SGCE-202ENST00000415788 TOB1P50616 345 aaPredicted RBP16.38■□□□□ 0.21
SGCE-202ENST00000415788 ATL3Q6DD88 541 aa16.38■□□□□ 0.21
SGCE-202ENST00000415788 CYP2W1Q8TAV3 490 aa16.38■□□□□ 0.21
SGCE-202ENST00000415788 ZFP91Q96JP5 570 aaPredicted RBP16.38■□□□□ 0.21
SGCE-202ENST00000415788 WDR11Q9BZH6 1224 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms