RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 C11orf16Q9NQ32 467 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 INSL6Q9Y581 213 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 TRIM6-TRIM34B2RNG4 842 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 OPLAHO14841 1288 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 LGR5O75473 907 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 RGS20O76081 388 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 PARP1P09874 1014 aaKnown RBP17.95■□□□□ 0.46
DDX56-202ENST00000415758 LEXMQ3ZCV2 418 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 STOX1Q6ZVD7 989 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 SAMD3Q8N6K7 520 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 UBE2ZQ9H832 354 aaPredicted RBP17.95■□□□□ 0.46
DDX56-202ENST00000415758 CD320Q9NPF0 282 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 ZSWIM5Q9P217 1185 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 EMSYQ7Z589 1322 aa17.95■□□□□ 0.46
DDX56-202ENST00000415758 CFBP00751 764 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 TGFB3P10600 412 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 HTRA4P83105 476 aaPredicted RBP17.94■□□□□ 0.46
DDX56-202ENST00000415758 ZNF200P98182 395 aaPredicted RBP17.94■□□□□ 0.46
DDX56-202ENST00000415758 HIC1Q14526 733 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 HSDL1Q3SXM5 330 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 CELF3Q5SZQ8 465 aaKnown RBP17.94■□□□□ 0.46
DDX56-202ENST00000415758 SERINC5Q86VE9 423 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 VSIG10LQ86VR7 867 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 SP7Q8TDD2 431 aaPredicted RBP17.94■□□□□ 0.46
DDX56-202ENST00000415758 RILPL2Q969X0 211 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 MTMR8Q96EF0 704 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 PDCD2LQ9BRP1 358 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 AMNQ9BXJ7 453 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 MTUS1Q9ULD2 1270 aa17.94■□□□□ 0.46
DDX56-202ENST00000415758 B4E1Z4 1266 aa17.93■□□□□ 0.46
DDX56-202ENST00000415758 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.93■□□□□ 0.46
DDX56-202ENST00000415758 FAM178BQ8IXR5 827 aa17.93■□□□□ 0.46
DDX56-202ENST00000415758 C16orf70Q9BSU1 422 aa17.93■□□□□ 0.46
DDX56-202ENST00000415758 OSBPL3Q9H4L5 887 aa17.93■□□□□ 0.46
DDX56-202ENST00000415758 VAT1LQ9HCJ6 419 aa17.93■□□□□ 0.46
DDX56-202ENST00000415758 MICAL3Q7RTP6 2002 aa17.93■□□□□ 0.46
DDX56-202ENST00000415758 RSPH10B2B2RC85 870 aa17.92■□□□□ 0.46
DDX56-202ENST00000415758 DHX16O60231 1041 aaKnown RBP17.92■□□□□ 0.46
DDX56-202ENST00000415758 RSPH10BP0C881 870 aa17.92■□□□□ 0.46
DDX56-202ENST00000415758 HOXC8P31273 242 aa17.92■□□□□ 0.46
DDX56-202ENST00000415758 RRP1P56182 461 aaKnown RBP17.92■□□□□ 0.46
DDX56-202ENST00000415758 PLEKHG4Q58EX7 1191 aa17.92■□□□□ 0.46
DDX56-202ENST00000415758 DBF4BQ8NFT6 615 aa17.92■□□□□ 0.46
DDX56-202ENST00000415758 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.92■□□□□ 0.46
DDX56-202ENST00000415758 DSCC1Q9BVC3 393 aa17.92■□□□□ 0.46
DDX56-202ENST00000415758 LNPKQ9C0E8 428 aa17.92■□□□□ 0.46
DDX56-202ENST00000415758 AMHP03971 560 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 SP2Q02086 613 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 PGM5Q15124 567 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 FAM117BQ6P1L5 589 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 STAG2Q8N3U4 1231 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 FBXO22Q8NEZ5 403 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 SPATA33Q96N06 139 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 SAMD11Q96NU1 681 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 C17orf80Q9BSJ5 609 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 KRT23Q9C075 422 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 CTNNA3Q9UI47 895 aa17.91■□□□□ 0.46
DDX56-202ENST00000415758 KLRF2D3W0D1 207 aa17.9■□□□□ 0.46
DDX56-202ENST00000415758 ZBTB5O15062 677 aa17.9■□□□□ 0.46
DDX56-202ENST00000415758 PPP1R11O60927 126 aaPredicted RBP17.9■□□□□ 0.46
DDX56-202ENST00000415758 GGPS1O95749 300 aa17.9■□□□□ 0.46
DDX56-202ENST00000415758 MYCLP12524 364 aaPredicted RBP17.9■□□□□ 0.46
DDX56-202ENST00000415758 KCNA5P22460 613 aa17.9■□□□□ 0.46
DDX56-202ENST00000415758 IMMTQ16891 758 aaKnown RBP17.9■□□□□ 0.46
DDX56-202ENST00000415758 CWC27Q6UX04 472 aaKnown RBP17.9■□□□□ 0.46
DDX56-202ENST00000415758 SMC5Q8IY18 1101 aa17.9■□□□□ 0.46
DDX56-202ENST00000415758 GJD3Q8N144 294 aa17.9■□□□□ 0.46
DDX56-202ENST00000415758 MRPL38Q96DV4 380 aaKnown RBP17.9■□□□□ 0.46
DDX56-202ENST00000415758 CNNM2Q9H8M5 875 aa17.9■□□□□ 0.46
DDX56-202ENST00000415758 PALM3A6NDB9 673 aaPredicted RBP17.89■□□□□ 0.45
DDX56-202ENST00000415758 H3BRB1 525 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 CAND2O75155 1236 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 UBA1P22314 1058 aaKnown RBP17.89■□□□□ 0.45
DDX56-202ENST00000415758 THPOP40225 353 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 SEC23AQ15436 765 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 PUS10Q3MIT2 529 aaKnown RBP17.89■□□□□ 0.45
DDX56-202ENST00000415758 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 MYOCDQ8IZQ8 938 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 NEK9Q8TD19 979 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 TOP1MTQ969P6 601 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 UBAC1Q9BSL1 405 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 TUT1Q9H6E5 874 aaKnown RBP17.89■□□□□ 0.45
DDX56-202ENST00000415758 PCDHA1Q9Y5I3 950 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 COL4A6Q14031 1691 aa17.89■□□□□ 0.45
DDX56-202ENST00000415758 C17orf102A2RUQ5 167 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 GRXCR2A6NFK2 248 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 PRR33A8MZF0 331 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 H3BNC9 293 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 HIP1O00291 1037 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 TRAF1Q13077 416 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 AAMPQ13685 434 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 COL19A1Q14993 1142 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 PTPROQ16827 1216 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 EPC2Q52LR7 807 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 IFIT1BQ5T764 474 aaKnown RBP17.88■□□□□ 0.45
DDX56-202ENST00000415758 IL31RAQ8NI17 732 aa17.88■□□□□ 0.45
DDX56-202ENST00000415758 ATP6V0A1Q93050 837 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms