RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 CELF3Q5SZQ8 465 aaKnown RBP23.56■■□□□ 1.36
PTPRU-203ENST00000415600 XRRA1Q6P2D8 792 aa23.56■■□□□ 1.36
PTPRU-203ENST00000415600 AFAP1L1Q8TED9 768 aa23.56■■□□□ 1.36
PTPRU-203ENST00000415600 MYL10Q9BUA6 226 aa23.56■■□□□ 1.36
PTPRU-203ENST00000415600 MLXIPQ9HAP2 919 aa23.56■■□□□ 1.36
PTPRU-203ENST00000415600 GGPS1O95749 300 aa23.55■■□□□ 1.36
PTPRU-203ENST00000415600 MYSM1Q5VVJ2 828 aa23.55■■□□□ 1.36
PTPRU-203ENST00000415600 DEFB128Q7Z7B8 93 aa23.55■■□□□ 1.36
PTPRU-203ENST00000415600 GAS2L1Q99501 681 aaPredicted RBP23.55■■□□□ 1.36
PTPRU-203ENST00000415600 FTOQ9C0B1 505 aaKnown RBP eCLIP23.55■■□□□ 1.36
PTPRU-203ENST00000415600 IQCF3P0C7M6 154 aa23.54■■□□□ 1.36
PTPRU-203ENST00000415600 PSEN2P49810 448 aa23.54■■□□□ 1.36
PTPRU-203ENST00000415600 NEDD9Q14511 834 aa23.54■■□□□ 1.36
PTPRU-203ENST00000415600 MFSD10Q14728 455 aa23.54■■□□□ 1.36
PTPRU-203ENST00000415600 SLC28A3Q9HAS3 691 aa23.54■■□□□ 1.36
PTPRU-203ENST00000415600 CXXC1Q9P0U4 656 aaPredicted RBP23.54■■□□□ 1.36
PTPRU-203ENST00000415600 PIK3CDO00329 1044 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 DLL1O00548 723 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 NOP56O00567 594 aaKnown RBP23.53■■□□□ 1.36
PTPRU-203ENST00000415600 F2P00734 622 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 KRT32Q14532 448 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 KIAA0753Q2KHM9 967 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.53■■□□□ 1.36
PTPRU-203ENST00000415600 KAT2BQ92831 832 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 KIF2CQ99661 725 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 GTF2IRD1Q9UHL9 959 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 FRMPD4Q14CM0 1322 aa23.53■■□□□ 1.36
PTPRU-203ENST00000415600 GRXCR1A8MXD5 290 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 RGS20O76081 388 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 HOXD8P13378 290 aaPredicted RBP23.52■■□□□ 1.36
PTPRU-203ENST00000415600 ATP2A2P16615 1042 aaKnown RBP23.52■■□□□ 1.36
PTPRU-203ENST00000415600 UBA1P22314 1058 aaKnown RBP23.52■■□□□ 1.36
PTPRU-203ENST00000415600 IL31RAQ8NI17 732 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 NEK1Q96PY6 1258 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 ALG1Q9BT22 464 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 FIBPO43427 364 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 ZNF286BP0CG31 522 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 PBX2P40425 430 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 GRIN2CQ14957 1233 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 NLRX1Q86UT6 975 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 SGMS1Q86VZ5 419 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 PSTPIP2Q9H939 334 aa23.52■■□□□ 1.36
PTPRU-203ENST00000415600 RBM28Q9NW13 759 aaKnown RBP23.52■■□□□ 1.36
PTPRU-203ENST00000415600 EPB41L2O43491 1005 aaKnown RBP23.51■■□□□ 1.35
PTPRU-203ENST00000415600 SELPP16109 830 aa23.51■■□□□ 1.35
PTPRU-203ENST00000415600 GDF6Q6KF10 455 aaPredicted RBP23.51■■□□□ 1.35
PTPRU-203ENST00000415600 FANCBQ8NB91 859 aa23.51■■□□□ 1.35
PTPRU-203ENST00000415600 GIMAP8Q8ND71 665 aaPredicted RBP23.51■■□□□ 1.35
PTPRU-203ENST00000415600 CDHR1Q96JP9 859 aa23.51■■□□□ 1.35
PTPRU-203ENST00000415600 INPP4AQ96PE3 977 aaPredicted RBP23.51■■□□□ 1.35
PTPRU-203ENST00000415600 SLC9A7Q96T83 725 aa23.51■■□□□ 1.35
PTPRU-203ENST00000415600 EHMT1Q9H9B1 1298 aa23.51■■□□□ 1.35
PTPRU-203ENST00000415600 HDAC6Q9UBN7 1215 aa23.51■■□□□ 1.35
PTPRU-203ENST00000415600 PCDHA11Q9Y5I1 949 aa23.51■■□□□ 1.35
PTPRU-203ENST00000415600 BAIAP3O94812 1187 aa23.5■■□□□ 1.35
PTPRU-203ENST00000415600 HMGB1P09429 215 aaKnown RBP23.5■■□□□ 1.35
PTPRU-203ENST00000415600 ICAM3P32942 547 aa23.5■■□□□ 1.35
PTPRU-203ENST00000415600 PCNX4Q63HM2 1172 aa23.5■■□□□ 1.35
PTPRU-203ENST00000415600 MICU3Q86XE3 530 aa23.5■■□□□ 1.35
PTPRU-203ENST00000415600 TEX2Q8IWB9 1127 aa23.5■■□□□ 1.35
PTPRU-203ENST00000415600 SRBD1Q8N5C6 995 aaKnown RBP23.5■■□□□ 1.35
PTPRU-203ENST00000415600 PHOSPHO2Q8TCD6 241 aa23.5■■□□□ 1.35
PTPRU-203ENST00000415600 PPP1R13LQ8WUF5 828 aa23.5■■□□□ 1.35
PTPRU-203ENST00000415600 KIF28PB7ZC32 967 aa23.49■■□□□ 1.35
PTPRU-203ENST00000415600 HAS3O00219 553 aa23.49■■□□□ 1.35
PTPRU-203ENST00000415600 PLEKHA8P1O95397 391 aa23.49■■□□□ 1.35
PTPRU-203ENST00000415600 PTK7Q13308 1070 aa23.49■■□□□ 1.35
PTPRU-203ENST00000415600 HSDL1Q3SXM5 330 aa23.49■■□□□ 1.35
PTPRU-203ENST00000415600 METTL7BQ6UX53 244 aa23.49■■□□□ 1.35
PTPRU-203ENST00000415600 SPDYE3A6NKU9 549 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 SPATA31C2B4DYI2 1134 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 RXRAP19793 462 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 KCNJ6P48051 423 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 FGD1P98174 961 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 RBL2Q08999 1139 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 USP17L6PQ6QN14 398 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 TMTC3Q6ZXV5 915 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 LRRC8DQ7L1W4 858 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 DHX32Q7L7V1 743 aaKnown RBP23.48■■□□□ 1.35
PTPRU-203ENST00000415600 ZNF215Q9UL58 517 aaPredicted RBP23.48■■□□□ 1.35
PTPRU-203ENST00000415600 SP2Q02086 613 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 TSGA10IPQ3SY00 556 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 PPP2R2DQ66LE6 453 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 SNX21Q969T3 373 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 SENP7Q9BQF6 1050 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 LRRC2Q9BYS8 371 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 NKX2-4Q9H2Z4 354 aa23.48■■□□□ 1.35
PTPRU-203ENST00000415600 CUL9Q8IWT3 2517 aa23.47■■□□□ 1.35
PTPRU-203ENST00000415600 SORBS3O60504 671 aa23.47■■□□□ 1.35
PTPRU-203ENST00000415600 EFCAB14O75071 495 aa23.47■■□□□ 1.35
PTPRU-203ENST00000415600 GNAT1P11488 350 aa23.47■■□□□ 1.35
PTPRU-203ENST00000415600 MRPS9P82933 396 aaKnown RBP23.47■■□□□ 1.35
PTPRU-203ENST00000415600 RTEL1Q9NZ71 1219 aa23.47■■□□□ 1.35
PTPRU-203ENST00000415600 H3BRB1 525 aa23.46■■□□□ 1.35
PTPRU-203ENST00000415600 MEIS2O14770 477 aa23.46■■□□□ 1.35
PTPRU-203ENST00000415600 ZBTB43O43298 467 aa23.46■■□□□ 1.35
PTPRU-203ENST00000415600 CYFIP1Q7L576 1253 aa23.46■■□□□ 1.35
PTPRU-203ENST00000415600 HEATR3Q7Z4Q2 680 aa23.46■■□□□ 1.35
PTPRU-203ENST00000415600 CCDC82Q8N4S0 544 aa23.46■■□□□ 1.35
PTPRU-203ENST00000415600 TUT1Q9H6E5 874 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms