RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 LRRD1A4D1F6 860 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 RBM26Q5T8P6 1007 aaKnown RBP22.46■■□□□ 1.19
AP1S3-205ENST00000415298 LCA5Q86VQ0 697 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 TEX9Q8N6V9 391 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 PGBD1Q96JS3 809 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 TRAIPQ9BWF2 469 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 TDRD3Q9H7E2 651 aaKnown RBP22.46■■□□□ 1.19
AP1S3-205ENST00000415298 ATP8A1Q9Y2Q0 1164 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 ASB3Q9Y575 518 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 PDCLQ13371 301 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 GBP7Q8N8V2 638 aaPredicted RBP22.46■■□□□ 1.19
AP1S3-205ENST00000415298 CORO1BQ9BR76 489 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 MRIQ9BWK5 157 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 OSBPL1AQ9BXW6 950 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 GMEB1Q9Y692 573 aa22.46■■□□□ 1.19
AP1S3-205ENST00000415298 CEP104O60308 925 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 AK2P54819 239 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 STOX1Q6ZVD7 989 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 RUFY3Q7L099 469 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 TMEM139Q8IV31 216 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 BRD8Q9H0E9 1235 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 SENP2Q9HC62 589 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 GRIN3BO60391 1043 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 PENKP01210 267 aaPredicted RBP22.45■■□□□ 1.18
AP1S3-205ENST00000415298 ELF3P78545 371 aaPredicted RBP22.45■■□□□ 1.18
AP1S3-205ENST00000415298 MXRA7P84157 204 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 HDLBPQ00341 1268 aaKnown RBP22.45■■□□□ 1.18
AP1S3-205ENST00000415298 NFIAQ12857 509 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 PICALMQ13492 652 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 SYNE3Q6ZMZ3 975 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 NKX2-3Q8TAU0 364 aa22.45■■□□□ 1.18
AP1S3-205ENST00000415298 DDX4Q9NQI0 724 aaKnown RBP22.45■■□□□ 1.18
AP1S3-205ENST00000415298 MINDY4BA8MYZ0 360 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 USP17L12C9JPN9 530 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 USP17L21D6R901 530 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 DNM1LO00429 736 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 CTDSPL2Q05D32 466 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 RIPK1Q13546 671 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 POSTNQ15063 836 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 WHAMMP3Q1A5X7 153 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 ANKRD20A8PQ5CZ79 823 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 SAMD7Q7Z3H4 446 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 SAMD3Q8N6K7 520 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 MAIP1Q8WWC4 291 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 POLR3CQ9BUI4 534 aaPredicted RBP22.44■■□□□ 1.18
AP1S3-205ENST00000415298 ATXN10Q9UBB4 475 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 TACC3Q9Y6A5 838 aa22.44■■□□□ 1.18
AP1S3-205ENST00000415298 CYP2D6P10635 497 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 MICALL2Q8IY33 904 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 ATP11CQ8NB49 1132 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 JAKMIP2Q96AA8 810 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 MTA3Q9BTC8 594 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 TUBGCP4Q9UGJ1 667 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 SAP30BPQ9UHR5 308 aaKnown RBP22.43■■□□□ 1.18
AP1S3-205ENST00000415298 CNOT7Q9UIV1 285 aaKnown RBP22.43■■□□□ 1.18
AP1S3-205ENST00000415298 SCAF8Q9UPN6 1271 aaKnown RBP22.43■■□□□ 1.18
AP1S3-205ENST00000415298 BZW2Q9Y6E2 419 aaKnown RBP22.43■■□□□ 1.18
AP1S3-205ENST00000415298 DPPA5A6NC42 116 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 ABLIM1O14639 778 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 ZNF213O14771 459 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 ALX1Q15699 326 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 KIAA0753Q2KHM9 967 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 SPECC1Q5M775 1068 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 FAM173BQ6P4H8 233 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 CCDC148Q8NFR7 591 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 NACAP1Q9BZK3 213 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 PIDD1Q9HB75 910 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 MCM9Q9NXL9 1143 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 HDAC9Q9UKV0 1011 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 CDK5RAP2Q96SN8 1893 aa22.43■■□□□ 1.18
AP1S3-205ENST00000415298 DNAJC8O75937 253 aaPredicted RBP22.42■■□□□ 1.18
AP1S3-205ENST00000415298 ZKSCAN1P17029 563 aaPredicted RBP22.42■■□□□ 1.18
AP1S3-205ENST00000415298 CXorf38Q8TB03 319 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 BARX2Q9UMQ3 279 aaPredicted RBP22.42■■□□□ 1.18
AP1S3-205ENST00000415298 L3MBTL1Q9Y468 752 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 CLRN2A0PK11 232 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 YY1P25490 414 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 LSP1P33241 339 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 ABL2P42684 1182 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 ADCY1Q08828 1119 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 IMMTQ16891 758 aaKnown RBP22.42■■□□□ 1.18
AP1S3-205ENST00000415298 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.42■■□□□ 1.18
AP1S3-205ENST00000415298 SAPCD2Q86UD0 394 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 ZFPM1Q8IX07 1006 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 L3MBTL3Q96JM7 780 aaPredicted RBP22.42■■□□□ 1.18
AP1S3-205ENST00000415298 PREBQ9HCU5 417 aa22.42■■□□□ 1.18
AP1S3-205ENST00000415298 SPDYE2BA6NHP3 402 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 KRT38O76015 456 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 SPDYE6P0CI01 402 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 DLGAP5Q15398 846 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 OLFML1Q6UWY5 402 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 TBC1D10CQ8IV04 446 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 MYOCDQ8IZQ8 938 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 GPC2Q8N158 579 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 STAG2Q8N3U4 1231 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 MYOZ2Q9NPC6 264 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 ATP8A2Q9NTI2 1148 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 TFIP11Q9UBB9 837 aaKnown RBP22.41■■□□□ 1.18
AP1S3-205ENST00000415298 SWAP70Q9UH65 585 aa22.41■■□□□ 1.18
AP1S3-205ENST00000415298 SCTRP47872 440 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms