RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 PROM2Q8N271 834 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 VIPAS39Q9H9C1 493 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 PANK4Q9NVE7 773 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 TBC1D7Q9P0N9 293 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 SWAP70Q9UH65 585 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 TRAF5O00463 557 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 ZBTB5O15062 677 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 FAM26FQ5R3K3 315 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 COG1Q8WTW3 980 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 CRAMP1Q96RY5 1269 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 MXD3Q9BW11 206 aa21.54■■□□□ 1.04
C2CD3-205ENST00000415191 SCNN1DP51172 638 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 FKBP3Q00688 224 aaKnown RBP21.53■■□□□ 1.04
C2CD3-205ENST00000415191 DDR1Q08345 913 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 CCDC40Q4G0X9 1142 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 MUM1L1Q5H9M0 696 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 PDXDC1Q6P996 788 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 COL4A3BPQ9Y5P4 624 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 ARFGEF1Q9Y6D6 1849 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 HOXA7P31268 230 aaPredicted RBP21.53■■□□□ 1.04
C2CD3-205ENST00000415191 MAGEA1P43355 309 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 ZCWPW2Q504Y3 356 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 GPATCH4Q5T3I0 446 aaKnown RBP21.53■■□□□ 1.04
C2CD3-205ENST00000415191 ANKRD13CQ8N6S4 541 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 FGFBP2Q9BYJ0 223 aa21.53■■□□□ 1.04
C2CD3-205ENST00000415191 BMP2KQ9NSY1 1161 aaPredicted RBP21.53■■□□□ 1.04
C2CD3-205ENST00000415191 SLURP2P0DP57 97 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 MYBL2P10244 700 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 CAPN2P17655 700 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 GFPT1Q06210 699 aaPredicted RBP21.52■■□□□ 1.04
C2CD3-205ENST00000415191 KCNMA1Q12791 1236 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 ALS2CR12Q96Q35 445 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 COA1Q9GZY4 146 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 NLRC4Q9NPP4 1024 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 HPCAL4Q9UM19 191 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 E9PMD0 336 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 PPEF1O14829 653 aaPredicted RBP21.52■■□□□ 1.04
C2CD3-205ENST00000415191 GCFC2P16383 781 aaKnown RBP21.52■■□□□ 1.04
C2CD3-205ENST00000415191 SEPT2Q15019 361 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 PSMB7Q99436 277 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 HINFPQ9BQA5 517 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 KIAA1024Q9UPX6 916 aa21.52■■□□□ 1.04
C2CD3-205ENST00000415191 LTBP1Q14766 1721 aa21.52■■□□□ 1.03
C2CD3-205ENST00000415191 RAD21O60216 631 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 AARSP49588 968 aaKnown RBP eCLIP21.51■■□□□ 1.03
C2CD3-205ENST00000415191 TDRD12Q587J7 1177 aaKnown RBP21.51■■□□□ 1.03
C2CD3-205ENST00000415191 NFRKBQ6P4R8 1299 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 FOXR2Q6PJQ5 311 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 CCNI2Q6ZMN8 369 aaPredicted RBP21.51■■□□□ 1.03
C2CD3-205ENST00000415191 GOLGA5Q8TBA6 731 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 SALL4Q9UJQ4 1053 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L15C9J2P7 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L13C9JLJ4 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L11C9JVI0 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L18D6R9N7 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L22D6RA61 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L17D6RBQ6 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L19D6RCP7 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L20D6RJB6 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 CACNB1Q02641 598 aaPredicted RBP21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L24Q0WX57 530 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 CCDC70Q6NSX1 233 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 USP17L6PQ6QN14 398 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 NELFCDQ8IXH7 590 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 OSBPL9Q96SU4 736 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 NT5C3AQ9H0P0 336 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 SUGT1Q9Y2Z0 365 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 MYO3BQ8WXR4 1341 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 KDM3AQ9Y4C1 1321 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 EP400Q96L91 3159 aa21.51■■□□□ 1.03
C2CD3-205ENST00000415191 CXCR5P32302 372 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 ACTN2P35609 894 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 RASSF7Q02833 373 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 ASTE1Q2TB18 679 aaPredicted RBP21.5■■□□□ 1.03
C2CD3-205ENST00000415191 SP8Q8IXZ3 490 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 SELENOOQ9BVL4 669 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 EDEM3Q9BZQ6 932 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 FAM204AQ9H8W3 233 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 NPHP3-ACAD11A0A0J9YXS1 232 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 RNF40O75150 1001 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 SYF2O95926 243 aaKnown RBP21.5■■□□□ 1.03
C2CD3-205ENST00000415191 SLC1A4P43007 532 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 HGSNATQ68CP4 663 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 CDC42EP5Q6NZY7 148 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 MTMR8Q96EF0 704 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 TRERF1Q96PN7 1200 aa21.5■■□□□ 1.03
C2CD3-205ENST00000415191 ZC3H12CQ9C0D7 883 aaKnown RBP21.5■■□□□ 1.03
C2CD3-205ENST00000415191 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
C2CD3-205ENST00000415191 POTEB3A0JP26 581 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 POTECB2RU33 542 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 HLA-DOAP06340 250 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 PLA2G4BP0C869 781 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 PRLRP16471 622 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 RAD51AP2Q09MP3 1159 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 EZH2Q15910 746 aaKnown RBP21.49■■□□□ 1.03
C2CD3-205ENST00000415191 HYIQ5T013 277 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 POTEBQ6S5H4 581 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 LEKR1Q6ZMV7 388 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 CCDC65Q8IXS2 484 aa21.49■■□□□ 1.03
C2CD3-205ENST00000415191 MMGT1Q8N4V1 131 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms