RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 GIMAP7Q8NHV1 300 aa10.09□□□□□ -0.79
TRA2B-204ENST00000414862 GATA6Q92908 595 aa10.09□□□□□ -0.79
TRA2B-204ENST00000414862 DCPSQ96C86 337 aaKnown RBP10.09□□□□□ -0.79
TRA2B-204ENST00000414862 SEC16BQ96JE7 1060 aa10.09□□□□□ -0.79
TRA2B-204ENST00000414862 FERD3LQ96RJ6 166 aa10.09□□□□□ -0.79
TRA2B-204ENST00000414862 DPH2Q9BQC3 489 aaPredicted RBP10.09□□□□□ -0.79
TRA2B-204ENST00000414862 RNF186Q9NXI6 227 aa10.09□□□□□ -0.79
TRA2B-204ENST00000414862 KLHL3Q9UH77 587 aa10.09□□□□□ -0.79
TRA2B-204ENST00000414862 PPT2Q9UMR5 302 aa10.09□□□□□ -0.79
TRA2B-204ENST00000414862 RRP7AQ9Y3A4 280 aaKnown RBP10.09□□□□□ -0.79
TRA2B-204ENST00000414862 BBOX1O75936 387 aa10.08□□□□□ -0.8
TRA2B-204ENST00000414862 U2AF1L5P0DN76 240 aaPredicted RBP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 ATF4P18848 351 aaPredicted RBP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 YARSP54577 528 aaKnown RBP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 U2AF1Q01081 240 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 DCTN1Q14203 1278 aa10.08□□□□□ -0.8
TRA2B-204ENST00000414862 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 PKN2Q16513 984 aaKnown RBP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 SHISA5Q8N114 240 aa10.08□□□□□ -0.8
TRA2B-204ENST00000414862 SLC43A3Q8NBI5 491 aa10.08□□□□□ -0.8
TRA2B-204ENST00000414862 FAM13CQ8NE31 585 aa10.08□□□□□ -0.8
TRA2B-204ENST00000414862 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 UTP14AQ9BVJ6 771 aaKnown RBP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 MKI67P46013 3256 aaKnown RBP10.08□□□□□ -0.8
TRA2B-204ENST00000414862 SHTN1A0MZ66 631 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 SLC22A31A6NKX4 558 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 CHURC1-FNTBB4DL54 471 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 ADM5C9JUS6 153 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 DNAJA2O60884 412 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 F13BP05160 661 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 RPS12P25398 132 aaKnown RBP10.07□□□□□ -0.8
TRA2B-204ENST00000414862 TBC1D10BQ4KMP7 808 aaPredicted RBP10.07□□□□□ -0.8
TRA2B-204ENST00000414862 FBXW10Q5XX13 1052 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 DDX46Q7L014 1031 aaKnown RBP10.07□□□□□ -0.8
TRA2B-204ENST00000414862 SP8Q8IXZ3 490 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 ZNF34Q8IZ26 560 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 TOP6BLQ8N6T0 577 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 MFSD2AQ8NA29 543 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 DPF2Q92785 391 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 HDAC9Q9UKV0 1011 aa10.07□□□□□ -0.8
TRA2B-204ENST00000414862 YDJCA8MPS7 323 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 FAM87AP0C7U9 286 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 IMPDH2P12268 514 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 GRAPQ13588 217 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 LRRFIP1Q32MZ4 808 aaKnown RBP10.06□□□□□ -0.8
TRA2B-204ENST00000414862 PRSS36Q5K4E3 855 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 OGFOD3Q6PK18 319 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 SHKBP1Q8TBC3 707 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 GRAPLQ8TC17 118 aaPredicted RBP10.06□□□□□ -0.8
TRA2B-204ENST00000414862 DUSP23Q9BVJ7 150 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 MIS18AQ9NYP9 233 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 GGA3Q9NZ52 723 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 GMIPQ9P107 970 aa10.06□□□□□ -0.8
TRA2B-204ENST00000414862 FAM170BA6NMN3 283 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 WDR64B1ANS9 1081 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 PSMD14O00487 310 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 LEFTY1O75610 366 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 ARID5AQ03989 594 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 DLK2Q6UY11 383 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 CCDC81Q6ZN84 652 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 RASAL3Q86YV0 1011 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 SLFN12Q8IYM2 578 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 ANTXR1Q9H6X2 564 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 HTTP42858 3142 aa10.05□□□□□ -0.8
TRA2B-204ENST00000414862 DNAJA1P31689 397 aaKnown RBP10.04□□□□□ -0.8
TRA2B-204ENST00000414862 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
TRA2B-204ENST00000414862 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
TRA2B-204ENST00000414862 ARSHQ5FYA8 562 aa10.04□□□□□ -0.8
TRA2B-204ENST00000414862 SLC10A5Q5PT55 438 aa10.04□□□□□ -0.8
TRA2B-204ENST00000414862 CPLX3Q8WVH0 158 aa10.04□□□□□ -0.8
TRA2B-204ENST00000414862 MIPEPQ99797 713 aa10.04□□□□□ -0.8
TRA2B-204ENST00000414862 SRRTQ9BXP5 876 aaKnown RBP10.04□□□□□ -0.8
TRA2B-204ENST00000414862 DBNDD1Q9H9R9 158 aa10.04□□□□□ -0.8
TRA2B-204ENST00000414862 DUOX1Q9NRD9 1551 aa10.04□□□□□ -0.8
TRA2B-204ENST00000414862 NUP98P52948 1817 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
TRA2B-204ENST00000414862 ECE2O60344 883 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 SLITRK5O94991 958 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 EIF4A1P60842 406 aaKnown RBP10.03□□□□□ -0.8
TRA2B-204ENST00000414862 FKBP1BP68106 108 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 CYP27C1Q4G0S4 372 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 DUSP27Q5VZP5 1158 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 OVOS1Q6IE37 1185 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 ZNF765Q7L2R6 523 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 TMEM40Q8WWA1 233 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 ATG4CQ96DT6 458 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 CDCA5Q96FF9 252 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 CRBNQ96SW2 442 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 EYA3Q99504 573 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 OSBPL1AQ9BXW6 950 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
TRA2B-204ENST00000414862 MEIS3P2A8K0S8 358 aa10.02□□□□□ -0.81
TRA2B-204ENST00000414862 LETMD1Q6P1Q0 360 aa10.02□□□□□ -0.81
TRA2B-204ENST00000414862 FBXO46Q6PJ61 603 aaPredicted RBP10.02□□□□□ -0.81
TRA2B-204ENST00000414862 ZDHHC13Q8IUH4 622 aa10.02□□□□□ -0.81
TRA2B-204ENST00000414862 RIN3Q8TB24 985 aa10.02□□□□□ -0.81
TRA2B-204ENST00000414862 GMLQ99445 158 aa10.02□□□□□ -0.81
TRA2B-204ENST00000414862 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.02□□□□□ -0.817e-10■■□□□ 12.3
TRA2B-204ENST00000414862 METTL22Q9BUU2 404 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms