RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 KCTD2Q14681 263 aa17.53■□□□□ 0.4
SHMT2-202ENST00000414700 Q4G0T1 1027 aa17.53■□□□□ 0.4
SHMT2-202ENST00000414700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHMT2-202ENST00000414700 ETNPPLQ8TBG4 499 aa17.53■□□□□ 0.4
SHMT2-202ENST00000414700 NSUN6Q8TEA1 469 aaKnown RBP17.53■□□□□ 0.4
SHMT2-202ENST00000414700 FGD4Q96M96 766 aa17.53■□□□□ 0.4
SHMT2-202ENST00000414700 WDR11Q9BZH6 1224 aa17.53■□□□□ 0.4
SHMT2-202ENST00000414700 DNAJC25-GNG10A0A024R161 153 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 PP2D1A8MPX8 630 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 MSH4O15457 936 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 ZSCAN20P17040 1043 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-202ENST00000414700 CMA1P23946 247 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 TECP42680 631 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 RESP18Q5W5W9 173 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 DTHD1Q6ZMT9 781 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 MRPS27Q92552 414 aaKnown RBP17.52■□□□□ 0.4
SHMT2-202ENST00000414700 ZFYVE28Q9HCC9 887 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 BRCA2P51587 3418 aa17.52■□□□□ 0.4
SHMT2-202ENST00000414700 CA12O43570 354 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 MBD3O95983 291 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 ARP10275 920 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 PFKFB1P16118 471 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 PRPHP41219 470 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 ALDH5A1P51649 535 aaPredicted RBP17.52■□□□□ 0.39
SHMT2-202ENST00000414700 SNW1Q13573 536 aaKnown RBP17.52■□□□□ 0.39
SHMT2-202ENST00000414700 GPR142Q7Z601 462 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 VSIG10LQ86VR7 867 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 PLA2G4DQ86XP0 818 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 PRIMPOLQ96LW4 560 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 NAP1L4Q99733 375 aaKnown RBP17.52■□□□□ 0.39
SHMT2-202ENST00000414700 MXRA8Q9BRK3 442 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 TTC12Q9H892 705 aaPredicted RBP17.52■□□□□ 0.39
SHMT2-202ENST00000414700 DACT1Q9NYF0 836 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 TMEM63CQ9P1W3 806 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 ZSWIM8A7E2V4 1837 aa17.52■□□□□ 0.39
SHMT2-202ENST00000414700 POTEMA6NI47 508 aa17.51■□□□□ 0.39
SHMT2-202ENST00000414700 MEIS1O00470 390 aa17.51■□□□□ 0.39
SHMT2-202ENST00000414700 ADORA2AP29274 412 aa17.51■□□□□ 0.39
SHMT2-202ENST00000414700 ZNF579Q8NAF0 562 aaKnown RBP17.51■□□□□ 0.39
SHMT2-202ENST00000414700 ENGASEQ8NFI3 743 aa17.51■□□□□ 0.39
SHMT2-202ENST00000414700 SYMPKQ92797 1274 aaKnown RBP17.51■□□□□ 0.39
SHMT2-202ENST00000414700 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
SHMT2-202ENST00000414700 MAF1Q9H063 256 aa17.51■□□□□ 0.39
SHMT2-202ENST00000414700 COBLO75128 1261 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 RGS20O76081 388 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 DNERQ8NFT8 737 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 KCNH7Q9NS40 1196 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 UBIAD1Q9Y5Z9 338 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 LRRC37A2A6NM11 1700 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 DOCK5Q9H7D0 1870 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 A0A087X0B3 334 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 FMR1NBQ8N0W7 255 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-202ENST00000414700 PKD2L1Q9P0L9 805 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 HPSEQ9Y251 543 aa17.5■□□□□ 0.39
SHMT2-202ENST00000414700 SYCE3A1L190 88 aa17.49■□□□□ 0.39
SHMT2-202ENST00000414700 MARCH6O60337 910 aa17.49■□□□□ 0.39
SHMT2-202ENST00000414700 CCND2P30279 289 aa17.49■□□□□ 0.39
SHMT2-202ENST00000414700 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHMT2-202ENST00000414700 PDILTQ8N807 584 aa17.49■□□□□ 0.39
SHMT2-202ENST00000414700 IGSF22Q8N9C0 903 aa17.49■□□□□ 0.39
SHMT2-202ENST00000414700 PCDHA12Q9UN75 941 aa17.49■□□□□ 0.39
SHMT2-202ENST00000414700 IVNS1ABPQ9Y6Y0 642 aa17.49■□□□□ 0.39
SHMT2-202ENST00000414700 TBC1D8O95759 1140 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 PTMAP06454 111 aaKnown RBP17.48■□□□□ 0.39
SHMT2-202ENST00000414700 CTGFP29279 349 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 LONP1P36776 959 aaKnown RBP17.48■□□□□ 0.39
SHMT2-202ENST00000414700 FAM160A1Q05DH4 1040 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 CCDC73Q6ZRK6 1079 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 JADE2Q9NQC1 790 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 MGAMO43451 1857 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 EDNRBP24530 442 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 MAPK4P31152 587 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
SHMT2-202ENST00000414700 SPIRE1Q08AE8 756 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 SEMA3FQ13275 785 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 MTMR1Q13613 665 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 GRB14Q14449 540 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 EEPD1Q7L9B9 569 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 PLEKHH3Q7Z736 793 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 INPP4AQ96PE3 977 aaPredicted RBP17.48■□□□□ 0.39
SHMT2-202ENST00000414700 ADD3Q9UEY8 706 aaKnown RBP17.48■□□□□ 0.39
SHMT2-202ENST00000414700 KCNH3Q9ULD8 1083 aa17.48■□□□□ 0.39
SHMT2-202ENST00000414700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.48■□□□□ 0.393e-7■■□□□ 13.1
SHMT2-202ENST00000414700 FAM237AA0A1B0GTK4 181 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 IPO5O00410 1097 aaKnown RBP17.47■□□□□ 0.39
SHMT2-202ENST00000414700 TBX3O15119 743 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 STRNO43815 780 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 ATP9AO75110 1047 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 SETQ01105 290 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-202ENST00000414700 CAMK4Q16566 473 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 SLFN12Q8IYM2 578 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 IWS1Q96ST2 819 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 TRPA1O75762 1119 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 ZNF202O95125 648 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 ALDH1A1P00352 501 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 SYKP43405 635 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 CAP1Q01518 475 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-202ENST00000414700 STXBP2Q15833 593 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms