RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 RPUSD2Q8IZ73 545 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 NSUN7Q8NE18 718 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 CTCFLQ8NI51 663 aaPredicted RBP19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 COPS5Q92905 334 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 PIGSQ96S52 555 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 SEMA6BQ9H3T3 888 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 GCOM1H8Y6P7 765 aaPredicted RBP19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 DDAH1O94760 285 aa19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 BRD1O95696 1058 aa19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 POLR2MP0CAP2 368 aa19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 CCT2P78371 535 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 FAM47CQ5HY64 1035 aa19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 ZNF654Q8IZM8 581 aa19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 LZTS2Q9BRK4 669 aa19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 NOC4LQ9BVI4 516 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 MRVI1Q9Y6F6 885 aa19.4■□□□□ 0.7
SCAMP4-204ENST00000414057 GOLGA8AA7E2F4 631 aa19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 PPP1R11O60927 126 aaPredicted RBP19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 ARIH2O95376 493 aa19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 FGBP02675 491 aa19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 SMARCA1P28370 1054 aa19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 GNAQP50148 359 aa19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 NBPF20Q3BBV1 942 aa19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 ZNF365Q70YC5 407 aa19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 GUCD1Q96NT3 240 aa19.39■□□□□ 0.69
SCAMP4-204ENST00000414057 OPLAHO14841 1288 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 STX6O43752 255 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 ACRP10323 421 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 SYT1P21579 422 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 LAMC2Q13753 1193 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 LY6KQ17RY6 165 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 CLEC17AQ6ZS10 378 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 C16orf59Q7L2K0 433 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 MICU3Q86XE3 530 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 FAM184AQ8NB25 1140 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 AFG1LQ8WV93 481 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 GBP4Q96PP9 640 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 PDCD2LQ9BRP1 358 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 SENP2Q9HC62 589 aa19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 TRMT13Q9NUP7 481 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 DDX41Q9UJV9 622 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-204ENST00000414057 CYTH3O43739 400 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 CTDNEP1O95476 244 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 PFKMP08237 780 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 MMP3P08254 477 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 MYCLP12524 364 aaPredicted RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 CCL23P55773 120 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 ARHGAP1Q07960 439 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 DGKDQ16760 1214 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 LARP1BQ659C4 914 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 HERVK_113Q902F9 699 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 TNPO1Q92973 898 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 EMID1Q96A84 441 aaPredicted RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 RRP36Q96EU6 259 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 CDX2Q99626 313 aaPredicted RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 KATNAL1Q9BW62 490 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 SPZ1Q9BXG8 430 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 NCOA5Q9HCD5 579 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 RBM28Q9NW13 759 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 SEC63Q9UGP8 760 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 NOD1Q9Y239 953 aa19.37■□□□□ 0.69
SCAMP4-204ENST00000414057 TGFB3P10600 412 aa19.36■□□□□ 0.69
SCAMP4-204ENST00000414057 DNAJB2P25686 324 aa19.36■□□□□ 0.69
SCAMP4-204ENST00000414057 HOXA13P31271 388 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-204ENST00000414057 RTN1Q16799 776 aa19.36■□□□□ 0.69
SCAMP4-204ENST00000414057 RASIP1Q5U651 963 aa19.36■□□□□ 0.69
SCAMP4-204ENST00000414057 UMODL1Q5DID0 1318 aa19.36■□□□□ 0.69
SCAMP4-204ENST00000414057 CCND2P30279 289 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 BFSP2Q13515 415 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 PGM5Q15124 567 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 VSIG10LQ86VR7 867 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 DHX37Q8IY37 1157 aaKnown RBP19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 FANCBQ8NB91 859 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 RETREG2Q8NC44 543 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 CUL5Q93034 780 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 WNT8AQ9H1J5 351 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 ATP6V1DQ9Y5K8 247 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 STK36Q9NRP7 1315 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 PITPNM1O00562 1244 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 JAK2O60674 1132 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 STAM2O75886 525 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 ZSCAN22P10073 491 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 CYP2C9P11712 490 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 RFC2P35250 354 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 PKP1Q13835 747 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 SESTD1Q86VW0 696 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 FCHSD1Q86WN1 690 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 CCDC155Q8N6L0 562 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 PPTC7Q8NI37 304 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 TIFAQ96CG3 184 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 TTYH1Q9H313 450 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 ZDHHC9Q9Y397 364 aa19.35■□□□□ 0.69
SCAMP4-204ENST00000414057 IFNAR1P17181 557 aa19.34■□□□□ 0.69
SCAMP4-204ENST00000414057 CHMP4BP1P59074 171 aa19.34■□□□□ 0.69
SCAMP4-204ENST00000414057 RAB30Q15771 203 aa19.34■□□□□ 0.69
SCAMP4-204ENST00000414057 GNPTABQ3T906 1256 aa19.34■□□□□ 0.69
SCAMP4-204ENST00000414057 MYH6P13533 1939 aa19.33■□□□□ 0.69
SCAMP4-204ENST00000414057 ACTN1P12814 892 aa19.33■□□□□ 0.68
SCAMP4-204ENST00000414057 CDC27P30260 824 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms