RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MFSD3Q96ES6 412 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 FMNL2Q96PY5 1086 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 DIRC2Q96SL1 478 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 SMOC1Q9H4F8 434 aa5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 TNPO3Q9Y5L0 923 aaKnown RBP5.56□□□□□ -1.52
HMGB1P11-201ENST00000413899 IRS2Q9Y4H2 1338 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 KRIT1O00522 736 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 GNAT1P11488 350 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 FBLN1P23142 703 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 LACTBP83111 547 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZCCHC8Q6NZY4 707 aaKnown RBP5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 ABHD17CQ6PCB6 329 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 TMC6Q7Z403 805 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 ANKLE2Q86XL3 938 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 FBXO15Q8NCQ5 510 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 PIP4K2CQ8TBX8 421 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 KCNJ15Q99712 375 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 MCOLN1Q9GZU1 580 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 SLKQ9H2G2 1235 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 DBR1Q9UK59 544 aaKnown RBP5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 SIT1Q9Y3P8 196 aa5.55□□□□□ -1.52
HMGB1P11-201ENST00000413899 CCDC66A2RUB6 948 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 FAM83GA6ND36 823 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 PAX4O43316 350 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 PYGMP11217 842 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 CANXP27824 592 aaKnown RBP5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 SRSF3P84103 164 aaKnown RBP5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 GPR19Q15760 415 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 C21orf62-AS1Q17RA5 79 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 DDX53Q86TM3 631 aaKnown RBP5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 MIB1Q86YT6 1006 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 CPA5Q8WXQ8 436 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 ORAI3Q9BRQ5 295 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 RNF38Q9H0F5 515 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 CNTD2Q9H8S5 307 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 RXFP1Q9HBX9 757 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 MBD1Q9UIS9 605 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 PALD1Q9ULE6 856 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 CBLCQ9ULV8 474 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 NUB1Q9Y5A7 615 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 PCDHB4Q9Y5E5 795 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 HCFC2Q9Y5Z7 792 aa5.54□□□□□ -1.52
HMGB1P11-201ENST00000413899 LOC105371045A0A1W2PR82 267 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZNF561-AS1K7EIQ3 104 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 NKRFO15226 690 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 OPA1O60313 960 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 SRGAP2CP0DJJ0 459 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 FLT3P36888 993 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 EPHA5P54756 1037 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 ST5P78524 1137 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 ZNF460Q14592 562 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 CRY1Q16526 586 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 OVCH1Q7RTY7 1134 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 LRRTM3Q86VH5 581 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 DHX37Q8IY37 1157 aaKnown RBP5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 POU5F2Q8N7G0 328 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 TTLL11Q8NHH1 800 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 DDX1Q92499 740 aaKnown RBP5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 SIRT5Q9NXA8 310 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 MYOTQ9UBF9 498 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 ASH2LQ9UBL3 628 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 DSEQ9UL01 958 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 PRKAB1Q9Y478 270 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 RNF114Q9Y508 228 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 PCDHA5Q9Y5H7 936 aa5.53□□□□□ -1.52
HMGB1P11-201ENST00000413899 A0A087X0B3 334 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 TCRBV5S2A0A599 114 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 TCRBV5S4A2TA0A5A2 114 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 GSG1L2A8MUP6 293 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 IRS4O14654 1257 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 FARP2O94887 1054 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 AMY2AP04746 511 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 COL6A2P12110 1019 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 PDE6AP16499 860 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 AMY2BP19961 511 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 MECP2P51608 486 aaKnown RBP5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 TMEM177Q53S58 311 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 CDCA2Q69YH5 1023 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 HHIPL2Q6UWX4 724 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 UBE2R2Q712K3 238 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 MILR1Q7Z6M3 343 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 AMIGO3Q86WK7 504 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 LDHDQ86WU2 507 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 TRIM48Q8IWZ4 208 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 FAM126BQ8IXS8 530 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 NLGN4XQ8N0W4 816 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 IGSF22Q8N9C0 903 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 BHLHE22Q8NFJ8 381 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 SH3RF2Q8TEC5 729 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 FAM84AQ96KN4 292 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 KCNK12Q9HB15 430 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 SMURF1Q9HCE7 757 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 GCM1Q9NP62 436 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 CATSPERZQ9NTU4 200 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 HSPBP1Q9NZL4 362 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 SAMD15Q9P1V8 674 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 SRPK3Q9UPE1 567 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 COQ6Q9Y2Z9 468 aa5.52□□□□□ -1.53
HMGB1P11-201ENST00000413899 CBX4O00257 560 aa5.51□□□□□ -1.53
HMGB1P11-201ENST00000413899 N4BP3O15049 544 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms