RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	KIF28P	B7ZC32	967 aa		14.95	□□□□□ -0.02
SF1-206	ENST00000413725	MAFG	O15525	162 aa		14.95	□□□□□ -0.02
SF1-206	ENST00000413725	DUSP11	O75319	330 aa	Known RBP	14.95	□□□□□ -0.02
SF1-206	ENST00000413725	RGS20	O76081	388 aa		14.95	□□□□□ -0.02
SF1-206	ENST00000413725	ITGB5	P18084	799 aa		14.95	□□□□□ -0.02
SF1-206	ENST00000413725	LETM2	Q2VYF4	491 aa		14.95	□□□□□ -0.02
SF1-206	ENST00000413725	DUSP28	Q4G0W2	176 aa		14.95	□□□□□ -0.02
SF1-206	ENST00000413725	EARS2	Q5JPH6	523 aa	Known RBP	14.95	□□□□□ -0.02
SF1-206	ENST00000413725	PLA2G4D	Q86XP0	818 aa		14.95	□□□□□ -0.02
SF1-206	ENST00000413725	DEFB118	Q96PH6	123 aa		14.95	□□□□□ -0.02
SF1-206	ENST00000413725	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	14.94	□□□□□ -0.02
SF1-206	ENST00000413725	SPATA31C2	B4DYI2	1134 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	FAM86B1	E9PN63	330 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	MEIS1	O00470	390 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	GJB1	P08034	283 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	FAM86B2	P0C5J1	330 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	SMPD1	P17405	629 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	TRAPPC10	P48553	1259 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	PRR16	Q569H4	304 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	ANO1	Q5XXA6	986 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	CCDC62	Q6P9F0	684 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	BRAP	Q7Z569	592 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	GIMAP8	Q8ND71	665 aa	Predicted RBP	14.94	□□□□□ -0.02
SF1-206	ENST00000413725	ABHD8	Q96I13	439 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	AP5M1	Q9H0R1	490 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	SPC25	Q9HBM1	224 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	DDX41	Q9UJV9	622 aa	Known RBP	14.94	□□□□□ -0.02
SF1-206	ENST00000413725	MTMR6	Q9Y217	621 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725		Q9Y3F1	56 aa		14.94	□□□□□ -0.02
SF1-206	ENST00000413725	RBM19	Q9Y4C8	960 aa	Known RBP	14.94	□□□□□ -0.02
SF1-206	ENST00000413725	IGLV3-22	A0A075B6J6	115 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	CYP3A7-CYP3A51P	A0A087WV96	503 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	CCNT1	O60563	726 aa	Known RBP	14.93	□□□□□ -0.02
SF1-206	ENST00000413725	ARIH2	O95376	493 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	TDP2	O95551	362 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	GH1	P01241	217 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	CAPN2	P17655	700 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	CYP3A7	P24462	503 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	SEMA3F	Q13275	785 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	NEDD9	Q14511	834 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	LY6K	Q17RY6	165 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	PPP4R3A	Q6IN85	833 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	TLK2	Q86UE8	772 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	OR6J1	Q8NGC5	347 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	CYP2W1	Q8TAV3	490 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	SENP7	Q9BQF6	1050 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	XPNPEP3	Q9NQH7	507 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	KCNH7	Q9NS40	1196 aa		14.93	□□□□□ -0.02
SF1-206	ENST00000413725	DDX25	Q9UHL0	483 aa	Known RBP	14.93	□□□□□ -0.02
SF1-206	ENST00000413725	GNE	Q9Y223	722 aa	Known RBP	14.93	□□□□□ -0.02
SF1-206	ENST00000413725	ADCY6	O43306	1168 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	EDIL3	O43854	480 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	ATP2B1	P20020	1258 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	UBA1	P22314	1058 aa	Known RBP	14.92	□□□□□ -0.02
SF1-206	ENST00000413725		Q4G0T1	1027 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	RILPL1	Q5EBL4	403 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	TTC38	Q5R3I4	469 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	LHX8	Q68G74	356 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	FERMT3	Q86UX7	667 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	DHX37	Q8IY37	1157 aa	Known RBP	14.92	□□□□□ -0.02
SF1-206	ENST00000413725	LENG1	Q96BZ8	264 aa	Predicted RBP	14.92	□□□□□ -0.02
SF1-206	ENST00000413725	MBOAT7	Q96N66	472 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	SDF4	Q9BRK5	362 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	14.92	□□□□□ -0.02
SF1-206	ENST00000413725	BRCA2	P51587	3418 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	SYNRG	Q9UMZ2	1314 aa		14.92	□□□□□ -0.02
SF1-206	ENST00000413725	DYNC1LI2	O43237	492 aa	Predicted RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	SGPL1	O95470	568 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	GGPS1	O95749	300 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	TFRC	P02786	760 aa	Known RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	AR	P10275	920 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	GJA8	P48165	433 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	ORC2	Q13416	577 aa	Predicted RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	LAMC2	Q13753	1193 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	BRDT	Q58F21	947 aa	Predicted RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	CELF3	Q5SZQ8	465 aa	Known RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	GJC2	Q5T442	439 aa	Predicted RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	RNF180	Q86T96	592 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	ARRDC4	Q8NCT1	418 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	U2AF1L4	Q8WU68	220 aa	Known RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	COPS5	Q92905	334 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	LENG9	Q96B70	501 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	ZNF577	Q9BSK1	485 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	UPF3A	Q9H1J1	476 aa	Known RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	MLXIP	Q9HAP2	919 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	AGO4	Q9HCK5	861 aa	Known RBP	14.91	□□□□□ -0.02
SF1-206	ENST00000413725	PKD2L1	Q9P0L9	805 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	TCEAL9	Q9UHQ7	104 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	NFASC	O94856	1347 aa		14.91	□□□□□ -0.02
SF1-206	ENST00000413725	IPO5	O00410	1097 aa	Known RBP	14.9	□□□□□ -0.02
SF1-206	ENST00000413725	SLC37A4	O43826	429 aa		14.9	□□□□□ -0.02
SF1-206	ENST00000413725	MARCH6	O60337	910 aa		14.9	□□□□□ -0.02
SF1-206	ENST00000413725	NEMF	O60524	1076 aa		14.9	□□□□□ -0.02
SF1-206	ENST00000413725	PGK1	P00558	417 aa		14.9	□□□□□ -0.02
SF1-206	ENST00000413725	C6orf222	P0C671	652 aa	Predicted RBP	14.9	□□□□□ -0.02
SF1-206	ENST00000413725	ZSCAN22	P10073	491 aa	Predicted RBP	14.9	□□□□□ -0.02
SF1-206	ENST00000413725	KCNA2	P16389	499 aa		14.9	□□□□□ -0.02
SF1-206	ENST00000413725	CPT1A	P50416	773 aa		14.9	□□□□□ -0.02
SF1-206	ENST00000413725	GJA9	P57773	515 aa		14.9	□□□□□ -0.02
SF1-206	ENST00000413725	SP2	Q02086	613 aa		14.9	□□□□□ -0.02

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms