RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PPIGQ13427 754 aaKnown RBP eCLIP30.25■■■□□ 2.431e-7■■□□□ 12.5
VEGFA-207ENST00000413642 PCNX4Q63HM2 1172 aa30.25■■■□□ 2.43
VEGFA-207ENST00000413642 TGFB3P10600 412 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 ICAM3P32942 547 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 RCAN1P53805 252 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 NAPAP54920 295 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 DEFB123Q8N688 67 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 ALG1Q9BT22 464 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 AGXT2Q9BYV1 514 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 MLXIPQ9HAP2 919 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 TELO2Q9Y4R8 837 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 KIAA1217Q5T5P2 1943 aa30.24■■■□□ 2.43
VEGFA-207ENST00000413642 STXBP3O00186 592 aa30.23■■■□□ 2.43
VEGFA-207ENST00000413642 EPB41L2O43491 1005 aaKnown RBP30.23■■■□□ 2.43
VEGFA-207ENST00000413642 SUPT20HL2P0C7V6 817 aa30.23■■■□□ 2.43
VEGFA-207ENST00000413642 GNPTABQ3T906 1256 aa30.23■■■□□ 2.43
VEGFA-207ENST00000413642 TMEM240Q5SV17 173 aa30.23■■■□□ 2.43
VEGFA-207ENST00000413642 SCLYQ96I15 445 aa30.23■■■□□ 2.43
VEGFA-207ENST00000413642 ZSWIM6Q9HCJ5 1215 aa30.23■■■□□ 2.43
VEGFA-207ENST00000413642 PCDHA6Q9UN73 950 aa30.23■■■□□ 2.43
VEGFA-207ENST00000413642 PCDHA8Q9Y5H6 950 aa30.23■■■□□ 2.43
VEGFA-207ENST00000413642 PPFIA3O75145 1194 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 STAM2O75886 525 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 PSEN2P49810 448 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 GPR153Q6NV75 609 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 ZNF365Q70YC5 407 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 RUFY3Q7L099 469 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 FBXL16Q8N461 479 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 PGBD1Q96JS3 809 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 LAMA3Q16787 3333 aa30.22■■■□□ 2.43
VEGFA-207ENST00000413642 SCN10AQ9Y5Y9 1956 aa30.21■■■□□ 2.43
VEGFA-207ENST00000413642 FIBPO43427 364 aa30.21■■■□□ 2.43
VEGFA-207ENST00000413642 HOXD8P13378 290 aaPredicted RBP30.21■■■□□ 2.43
VEGFA-207ENST00000413642 PTPN11Q06124 597 aaPredicted RBP30.21■■■□□ 2.43
VEGFA-207ENST00000413642 GDF6Q6KF10 455 aaPredicted RBP30.21■■■□□ 2.43
VEGFA-207ENST00000413642 CTAGE1Q96RT6 745 aa30.21■■■□□ 2.43
VEGFA-207ENST00000413642 LARP6Q9BRS8 491 aaKnown RBP30.21■■■□□ 2.43
VEGFA-207ENST00000413642 IL23AQ9NPF7 189 aa30.21■■■□□ 2.43
VEGFA-207ENST00000413642 SPDYE3A6NKU9 549 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 PPFIA4O75335 1185 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 TOB2Q14106 344 aaPredicted RBP30.2■■■□□ 2.43
VEGFA-207ENST00000413642 MFSD10Q14728 455 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 XRRA1Q6P2D8 792 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 CYFIP1Q7L576 1253 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 VWCEQ96DN2 955 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 UPF3BQ9BZI7 483 aaKnown RBP30.2■■■□□ 2.43
VEGFA-207ENST00000413642 RIC8AQ9NPQ8 531 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 TMEM260Q9NX78 707 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 HDAC6Q9UBN7 1215 aa30.2■■■□□ 2.43
VEGFA-207ENST00000413642 SMCO2A6NFE2 343 aa30.19■■■□□ 2.42
VEGFA-207ENST00000413642 HAS3O00219 553 aa30.19■■■□□ 2.42
VEGFA-207ENST00000413642 F2P00734 622 aa30.19■■■□□ 2.42
VEGFA-207ENST00000413642 ITGB5P18084 799 aa30.19■■■□□ 2.42
VEGFA-207ENST00000413642 PTGISQ16647 500 aa30.19■■■□□ 2.42
VEGFA-207ENST00000413642 KIAA0753Q2KHM9 967 aa30.19■■■□□ 2.42
VEGFA-207ENST00000413642 FAM109BQ6ICB4 259 aaPredicted RBP30.19■■■□□ 2.42
VEGFA-207ENST00000413642 BARHL2Q9NY43 387 aa30.19■■■□□ 2.42
VEGFA-207ENST00000413642 SZT2Q5T011 3432 aa30.19■■■□□ 2.42
VEGFA-207ENST00000413642 CCDC196A0A1B0GTZ2 297 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 RBAK-RBAKDNI3L0D1 243 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 ADAMTS3O15072 1205 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 PDIA3P30101 505 aaKnown RBP30.18■■■□□ 2.42
VEGFA-207ENST00000413642 ADCY7P51828 1080 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 CCT2P78371 535 aaKnown RBP30.18■■■□□ 2.42
VEGFA-207ENST00000413642 PPP1R18Q6NYC8 613 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 NLRX1Q86UT6 975 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 SESTD1Q86VW0 696 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 PHKBQ93100 1093 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 C16orf70Q9BSU1 422 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 NCOA5Q9HCD5 579 aaKnown RBP30.18■■■□□ 2.42
VEGFA-207ENST00000413642 NOD1Q9Y239 953 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 CYP46A1Q9Y6A2 500 aa30.18■■■□□ 2.42
VEGFA-207ENST00000413642 NID2Q14112 1375 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 ATP9AO75110 1047 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 SP4Q02446 784 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 NEDD9Q14511 834 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 HIC1Q14526 733 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 PKN1Q16512 942 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 PFKFB3Q16875 520 aaPredicted RBP30.17■■■□□ 2.42
VEGFA-207ENST00000413642 C7orf31Q8N865 590 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 FAM161BQ96MY7 647 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 PKD2L1Q9P0L9 805 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 UBIAD1Q9Y5Z9 338 aa30.17■■■□□ 2.42
VEGFA-207ENST00000413642 EVCP57679 992 aa30.16■■■□□ 2.42
VEGFA-207ENST00000413642 SMAD3P84022 425 aaKnown RBP30.16■■■□□ 2.42
VEGFA-207ENST00000413642 ZNF200P98182 395 aaPredicted RBP30.16■■■□□ 2.42
VEGFA-207ENST00000413642 NTRK3Q16288 839 aa30.16■■■□□ 2.42
VEGFA-207ENST00000413642 METTL7BQ6UX53 244 aa30.16■■■□□ 2.42
VEGFA-207ENST00000413642 GPR20Q99678 358 aa30.16■■■□□ 2.42
VEGFA-207ENST00000413642 MTMR10Q9NXD2 777 aa30.16■■■□□ 2.42
VEGFA-207ENST00000413642 CXXC1Q9P0U4 656 aaPredicted RBP30.16■■■□□ 2.42
VEGFA-207ENST00000413642 GTF2IRD1Q9UHL9 959 aa30.16■■■□□ 2.42
VEGFA-207ENST00000413642 hCG_1984214I3L0E3 225 aa30.15■■■□□ 2.42
VEGFA-207ENST00000413642 PRPF3O43395 683 aaKnown RBP30.15■■■□□ 2.42
VEGFA-207ENST00000413642 FGBP02675 491 aa30.15■■■□□ 2.42
VEGFA-207ENST00000413642 SCG2P13521 617 aa30.15■■■□□ 2.42
VEGFA-207ENST00000413642 RASIP1Q5U651 963 aa30.15■■■□□ 2.42
VEGFA-207ENST00000413642 PSRC1Q6PGN9 363 aaPredicted RBP30.15■■■□□ 2.42
VEGFA-207ENST00000413642 ZNF713Q8N859 430 aaPredicted RBP30.15■■■□□ 2.42
VEGFA-207ENST00000413642 DHX38Q92620 1227 aaKnown RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms