RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 RTFDC1Q9BY42 306 aaPredicted RBP7.2□□□□□ -1.26
NOD1-203ENST00000413433 PRDM11Q9NQV5 511 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 CRIM1Q9NZV1 1036 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 PPP1R9AQ9ULJ8 1098 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 PCDHB12Q9Y5F1 795 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 ARHGEF10O15013 1369 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 GPRASP1Q5JY77 1395 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 RAB3GAP2Q9H2M9 1393 aa7.2□□□□□ -1.26
NOD1-203ENST00000413433 NRXN1Q9ULB1 1477 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 TCRBV16S1A1N1A0A5B0 115 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 AQP7O14520 342 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 DDX3YO15523 660 aaKnown RBP7.19□□□□□ -1.26
NOD1-203ENST00000413433 RNGTTO60942 597 aaKnown RBP7.19□□□□□ -1.26
NOD1-203ENST00000413433 FBXO21O94952 628 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 U2AF1L5P0DN76 240 aaPredicted RBP7.19□□□□□ -1.26
NOD1-203ENST00000413433 NAT1P18440 290 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 HOXC12P31275 282 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 NTF4P34130 210 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 GFRA1P56159 465 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 U2AF1Q01081 240 aaKnown RBP eCLIP7.19□□□□□ -1.26
NOD1-203ENST00000413433 TTLL4Q14679 1199 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 SETDB1Q15047 1291 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 EZH2Q15910 746 aaKnown RBP7.19□□□□□ -1.26
NOD1-203ENST00000413433 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 GTF2IRD2BQ6EKJ0 949 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 TMED8Q6PL24 325 aaPredicted RBP7.19□□□□□ -1.26
NOD1-203ENST00000413433 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 DDX53Q86TM3 631 aaKnown RBP7.19□□□□□ -1.26
NOD1-203ENST00000413433 GTF2IRD2Q86UP8 949 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 MAGEB6Q8N7X4 407 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 GALNT11Q8NCW6 608 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 TRIM8Q9BZR9 551 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 PRDM16Q9HAZ2 1276 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 PRDM6Q9NQX0 595 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 SPATA31A5Q5VU36 1347 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 SPATA31A7Q8IWB4 1347 aa7.19□□□□□ -1.26
NOD1-203ENST00000413433 FMN2Q9NZ56 1722 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 C9orf172C9J069 976 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 FAM229AH3BQW9 127 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 M0R082 166 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 GABRDO14764 452 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 ADAM11O75078 769 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 DLGAP3O95886 979 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 CPP00450 1065 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 CAPNS1P04632 268 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 ZSCAN20P17040 1043 aaPredicted RBP7.18□□□□□ -1.26
NOD1-203ENST00000413433 BPIP17213 487 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 CCND1P24385 295 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 CAP2P40123 477 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 ECI1P42126 302 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 ID4P47928 161 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 SLBPQ14493 270 aaKnown RBP eCLIP7.18□□□□□ -1.26
NOD1-203ENST00000413433 PPP2R5DQ14738 602 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 PTPN21Q16825 1174 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 LONRF3Q496Y0 759 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 ZCCHC8Q6NZY4 707 aaKnown RBP7.18□□□□□ -1.26
NOD1-203ENST00000413433 APBB1IPQ7Z5R6 666 aaPredicted RBP7.18□□□□□ -1.26
NOD1-203ENST00000413433 MTDHQ86UE4 582 aaKnown RBP7.18□□□□□ -1.26
NOD1-203ENST00000413433 ARHGEF39Q8N4T4 335 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 ZNF417Q8TAU3 575 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 JPH3Q8WXH2 748 aaPredicted RBP7.18□□□□□ -1.26
NOD1-203ENST00000413433 BRF1Q92994 677 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 ZNF587Q96SQ5 575 aaPredicted RBP7.18□□□□□ -1.26
NOD1-203ENST00000413433 CDK19Q9BWU1 502 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 FOXQ1Q9C009 403 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 NOL6Q9H6R4 1146 aaKnown RBP7.18□□□□□ -1.26
NOD1-203ENST00000413433 DISC1Q9NRI5 854 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 LUC7L2Q9Y383 392 aaKnown RBP7.18□□□□□ -1.26
NOD1-203ENST00000413433 USP32Q8NFA0 1604 aa7.18□□□□□ -1.26
NOD1-203ENST00000413433 A0A087WZG4 1122 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 GAS7O60861 476 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 CRTAMO95727 393 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 SF1Q15637 639 aaKnown RBP7.17□□□□□ -1.26
NOD1-203ENST00000413433 DUOXA2Q1HG44 320 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 C4orf46Q504U0 113 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 TMEM145Q8NBT3 493 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 NKX2-4Q9H2Z4 354 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 CYP4F12Q9HCS2 524 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 SAMD15Q9P1V8 674 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 IP6K2Q9UHH9 426 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 TRAF6Q9Y4K3 522 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 FHOD1Q9Y613 1164 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 KIAA0232Q92628 1395 aa7.17□□□□□ -1.26
NOD1-203ENST00000413433 RGPD8O14715 1765 aaPredicted RBP7.16□□□□□ -1.26
NOD1-203ENST00000413433 HMGB1P1B2RPK0 211 aaPredicted RBP7.16□□□□□ -1.26
NOD1-203ENST00000413433 SHOXO15266 292 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 RFPL1O75677 317 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 ABLIM3O94929 683 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 SNUPNO95149 360 aaKnown RBP7.16□□□□□ -1.26
NOD1-203ENST00000413433 NEFMP07197 916 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 NID1P14543 1247 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 AMPD2Q01433 879 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 GRB10Q13322 594 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 GRIK4Q16099 956 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 NTRK3Q16288 839 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 ABCB5Q2M3G0 1257 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 SKOR2Q2VWA4 1001 aaPredicted RBP7.16□□□□□ -1.26
NOD1-203ENST00000413433 NBPF8Q3BBV2 869 aa7.16□□□□□ -1.26
NOD1-203ENST00000413433 MCTP1Q6DN14 999 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms