RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 DCDC2CA8MYV0 355 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 RARBP10826 455 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 CSF2RAP15509 400 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 CALML3P27482 149 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 MARCKSP29966 332 aaPredicted RBP19.44■□□□□ 0.7
PTPRC-206ENST00000413409 USP14P54578 494 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 NR5A1Q13285 461 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 NPY5RQ15761 445 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 RNF180Q86T96 592 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 ELOA2Q8IYF1 753 aaPredicted RBP19.44■□□□□ 0.7
PTPRC-206ENST00000413409 ZNF579Q8NAF0 562 aaKnown RBP19.44■□□□□ 0.7
PTPRC-206ENST00000413409 OXER1Q8TDS5 423 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 TMEM47Q9BQJ4 181 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 SPATC1LQ9H0A9 340 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 RRAGDQ9NQL2 400 aaPredicted RBP19.44■□□□□ 0.7
PTPRC-206ENST00000413409 SWAP70Q9UH65 585 aa19.44■□□□□ 0.7
PTPRC-206ENST00000413409 FAM86C2PA6NEL3 165 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 ZNF202O95125 648 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 SYKP43405 635 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 TRAPPC10P48553 1259 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 PPIGQ13427 754 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTPRC-206ENST00000413409 TATDN1Q6P1N9 297 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 SHC4Q6S5L8 630 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 MICALL1Q8N3F8 863 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 SHCBP1Q8NEM2 672 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 TSPYL2Q9H2G4 693 aaPredicted RBP19.43■□□□□ 0.7
PTPRC-206ENST00000413409 MAD2L2Q9UI95 211 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 MSRAQ9UJ68 235 aa19.43■□□□□ 0.7
PTPRC-206ENST00000413409 FBXO2Q9UK22 296 aaPredicted RBP19.43■□□□□ 0.7
PTPRC-206ENST00000413409 PALM3A6NDB9 673 aaPredicted RBP19.42■□□□□ 0.7
PTPRC-206ENST00000413409 ADAMTS4O75173 837 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 ADCY5O95622 1261 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 TOP1P11387 765 aaKnown RBP19.42■□□□□ 0.7
PTPRC-206ENST00000413409 SMARCA1P28370 1054 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 CLCN1P35523 988 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 ZNF165P49910 485 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 RAB30Q15771 203 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 SDF4Q9BRK5 362 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 SPZ1Q9BXG8 430 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 DNAJC25Q9H1X3 360 aa19.42■□□□□ 0.7
PTPRC-206ENST00000413409 GPR37L1O60883 481 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 ACLYP53396 1101 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 GALNT17Q6IS24 598 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 CEP57L1Q8IYX8 460 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 DAGLBQ8NCG7 672 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 CCDC148Q8NFR7 591 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 SNX27Q96L92 541 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 EHD4Q9H223 541 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 SLC28A3Q9HAS3 691 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 STARD7Q9NQZ5 370 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 KIAA1468Q9P260 1216 aa19.41■□□□□ 0.7
PTPRC-206ENST00000413409 SRPRBQ9Y5M8 271 aaKnown RBP19.41■□□□□ 0.7
PTPRC-206ENST00000413409 PRRC2BQ5JSZ5 2229 aaKnown RBP19.4■□□□□ 0.7
PTPRC-206ENST00000413409 IGKV6D-41A0A0C4DH26 115 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 TLL1O43897 1013 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 ZNF865P0CJ78 1059 aaPredicted RBP19.4■□□□□ 0.7
PTPRC-206ENST00000413409 COG2Q14746 738 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 AAK1Q2M2I8 961 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 PPP4R3BQ5MIZ7 849 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 ABRAQ8N0Z2 381 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 CABP5Q9NP86 173 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 SLC5A4Q9NY91 659 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 FAM13BQ9NYF5 915 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 NRBP1Q9UHY1 535 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 STX8Q9UNK0 236 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 PCDHB6Q9Y5E3 794 aa19.4■□□□□ 0.7
PTPRC-206ENST00000413409 GBF1Q92538 1859 aa19.39■□□□□ 0.7
PTPRC-206ENST00000413409 hCG_1642624A0A1W2PR95 340 aa19.39■□□□□ 0.69
PTPRC-206ENST00000413409 HLA-DOAP06340 250 aa19.39■□□□□ 0.69
PTPRC-206ENST00000413409 CDK7P50613 346 aa19.39■□□□□ 0.69
PTPRC-206ENST00000413409 IQCB1Q15051 598 aa19.39■□□□□ 0.69
PTPRC-206ENST00000413409 CCSAPQ6IQ19 270 aaPredicted RBP19.39■□□□□ 0.69
PTPRC-206ENST00000413409 LUZP1Q86V48 1076 aa19.39■□□□□ 0.69
PTPRC-206ENST00000413409 HERVK_113Q902F9 699 aa19.39■□□□□ 0.69
PTPRC-206ENST00000413409 BPIFA3Q9BQP9 254 aa19.39■□□□□ 0.69
PTPRC-206ENST00000413409 TSEN34Q9BSV6 310 aaKnown RBP19.39■□□□□ 0.69
PTPRC-206ENST00000413409 NAT10Q9H0A0 1025 aaKnown RBP19.39■□□□□ 0.69
PTPRC-206ENST00000413409 HOXC10Q9NYD6 342 aa19.39■□□□□ 0.69
PTPRC-206ENST00000413409 PARP1P09874 1014 aaKnown RBP19.38■□□□□ 0.69
PTPRC-206ENST00000413409 MYOGP15173 224 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 NLRP5P59047 1200 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 IRX5P78411 483 aaPredicted RBP19.38■□□□□ 0.69
PTPRC-206ENST00000413409 KIAA1755Q5JYT7 1200 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 CCDC174Q6PII3 467 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 C11orf57Q6ZUT1 292 aaPredicted RBP19.38■□□□□ 0.69
PTPRC-206ENST00000413409 NCAPG2Q86XI2 1143 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 STAG2Q8N3U4 1231 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 KLHDC9Q8NEP7 349 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 CEP95Q96GE4 821 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 MROH8Q9H579 483 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 SERPINB13Q9UIV8 391 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 KCNH3Q9ULD8 1083 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 ZKSCAN5Q9Y2L8 839 aa19.38■□□□□ 0.69
PTPRC-206ENST00000413409 A0A1W2PRG0 241 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 PTMAP06454 111 aaKnown RBP19.37■□□□□ 0.69
PTPRC-206ENST00000413409 PGK2P07205 417 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 RABGGTBP53611 331 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 ZRSR1Q15695 479 aaKnown RBP19.37■□□□□ 0.69
PTPRC-206ENST00000413409 KCNA10Q16322 511 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 ABCB5Q2M3G0 1257 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms