RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 FGFR1P11362 822 aa7.31□□□□□ -1.24
HDAC9-205ENST00000411993 SYN1P17600 705 aa7.31□□□□□ -1.24
HDAC9-205ENST00000411993 STAT5AP42229 794 aa7.31□□□□□ -1.24
HDAC9-205ENST00000411993 SARSP49591 514 aaKnown RBP7.31□□□□□ -1.24
HDAC9-205ENST00000411993 FRMD5Q7Z6J6 570 aa7.31□□□□□ -1.24
HDAC9-205ENST00000411993 ADAMTS20P59510 1910 aa7.31□□□□□ -1.24
HDAC9-205ENST00000411993 CCDC85CA6NKD9 419 aa7.3□□□□□ -1.24
HDAC9-205ENST00000411993 FOXD2O60548 495 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-205ENST00000411993 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
HDAC9-205ENST00000411993 NKX3-2P78367 333 aa7.3□□□□□ -1.24
HDAC9-205ENST00000411993 IFRD2Q12894 506 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-205ENST00000411993 RSPO2Q6UXX9 243 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-205ENST00000411993 NSMFQ6X4W1 530 aa7.3□□□□□ -1.24
HDAC9-205ENST00000411993 LINC00482Q8N8I6 264 aa7.3□□□□□ -1.24
HDAC9-205ENST00000411993 KYQ8NBH2 561 aa7.3□□□□□ -1.24
HDAC9-205ENST00000411993 DCAF4Q8WV16 495 aa7.3□□□□□ -1.24
HDAC9-205ENST00000411993 TEPSINQ96N21 525 aa7.3□□□□□ -1.24
HDAC9-205ENST00000411993 C11orf84Q9BUA3 381 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-205ENST00000411993 SPATA6Q9NWH7 488 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-205ENST00000411993 MAFKO60675 156 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 MSCO60682 206 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 GJA9P57773 515 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 EMC4Q5J8M3 183 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 STK32CQ86UX6 486 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 TTLL6Q8N841 843 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 CXorf38Q8TB03 319 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC9-205ENST00000411993 SYT3Q9BQG1 590 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 MYOTQ9UBF9 498 aa7.29□□□□□ -1.24
HDAC9-205ENST00000411993 TCRBV5S2A0A599 114 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 KRIT1O00522 736 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 PDPK1O15530 556 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 GTF2F1P35269 517 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC9-205ENST00000411993 THBS2P35442 1172 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 ITGA1P56199 1179 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 MTERF2Q49AM1 385 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 ARRDC4Q8NCT1 418 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 PHOSPHO1Q8TCT1 267 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 OSBP2Q969R2 916 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 ZNF669Q96BR6 464 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-205ENST00000411993 TOE1Q96GM8 510 aaKnown RBP7.28□□□□□ -1.24
HDAC9-205ENST00000411993 C8orf37Q96NL8 207 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 SPATA9Q9BWV2 254 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 JAM3Q9BX67 310 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 DTLQ9NZJ0 730 aa7.28□□□□□ -1.24
HDAC9-205ENST00000411993 PPARGC1AQ9UBK2 798 aaKnown RBP7.28□□□□□ -1.24
HDAC9-205ENST00000411993 TADA3O75528 432 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 KIZQ2M2Z5 673 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 CR1LQ2VPA4 569 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 YOD1Q5VVQ6 348 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-205ENST00000411993 NBPF6Q5VWK0 638 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 KCNT2Q6UVM3 1135 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 DPH6Q7L8W6 267 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 NBPF4Q96M43 638 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 ZFYVE21Q9BQ24 234 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 SMOC1Q9H4F8 434 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 MSRB2Q9Y3D2 182 aa7.27□□□□□ -1.25
HDAC9-205ENST00000411993 BLACEA4D250 179 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 GRK2P25098 689 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 RPL13P26373 211 aaKnown RBP7.26□□□□□ -1.25
HDAC9-205ENST00000411993 GRK3P35626 688 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 BUD31P41223 144 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-205ENST00000411993 GPR85P60893 370 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 RASGRF1Q13972 1273 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 NTRK3Q16288 839 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 UBXN11Q5T124 520 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 LBX2Q6XYB7 198 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 SPATC1Q76KD6 591 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 ZNF761Q86XN6 746 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-205ENST00000411993 PIP4K2CQ8TBX8 421 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 ADAMTS17Q8TE56 1095 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 CDC6Q99741 560 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 PFDN2Q9UHV9 154 aa7.26□□□□□ -1.25
HDAC9-205ENST00000411993 CELA3BP08861 270 aa7.25□□□□□ -1.25
HDAC9-205ENST00000411993 SSRP1Q08945 709 aaKnown RBP7.25□□□□□ -1.25
HDAC9-205ENST00000411993 STYK1Q6J9G0 422 aa7.25□□□□□ -1.25
HDAC9-205ENST00000411993 CYP4F22Q6NT55 531 aa7.25□□□□□ -1.25
HDAC9-205ENST00000411993 IFNL3Q8IZI9 196 aa7.25□□□□□ -1.25
HDAC9-205ENST00000411993 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.25□□□□□ -1.25
HDAC9-205ENST00000411993 IPO9Q96P70 1041 aaKnown RBP7.25□□□□□ -1.25
HDAC9-205ENST00000411993 HIRIP3Q9BW71 556 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-205ENST00000411993 CDIP1Q9H305 208 aa7.25□□□□□ -1.25
HDAC9-205ENST00000411993 SLC6A20Q9NP91 592 aa7.25□□□□□ -1.25
HDAC9-205ENST00000411993 SIRPGQ9P1W8 387 aa7.25□□□□□ -1.25
HDAC9-205ENST00000411993 SLC27A2O14975 620 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 NOBOXO60393 691 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 GNAT1P11488 350 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 RTP5Q14D33 572 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 PRAMEF18Q5VWM3 479 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 TEPPQ6URK8 271 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 TRIM48Q8IWZ4 208 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 DDX1Q92499 740 aaKnown RBP7.24□□□□□ -1.25
HDAC9-205ENST00000411993 ZSWIM3Q96MP5 696 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 CLIC6Q96NY7 704 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 KCNJ15Q99712 375 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 ALG1Q9BT22 464 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 BDH2Q9BUT1 245 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 CCDC113Q9H0I3 377 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 ASH2LQ9UBL3 628 aa7.24□□□□□ -1.25
HDAC9-205ENST00000411993 NUB1Q9Y5A7 615 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms