RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 AP3B2Q13367 1082 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 CUL4BQ13620 913 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 SEPT2Q15019 361 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 DNTTIP2Q5QJE6 756 aaKnown RBP8.43□□□□□ -1.06
CXCR4-202ENST00000409817 ZNF658Q5TYW1 1059 aaPredicted RBP8.43□□□□□ -1.06
CXCR4-202ENST00000409817 JAKMIP3Q5VZ66 844 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 MOXD1Q6UVY6 613 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 BTNL9Q6UXG8 535 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 COA7Q96BR5 231 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 CALML4Q96GE6 196 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 NAP1L5Q96NT1 182 aaPredicted RBP8.43□□□□□ -1.06
CXCR4-202ENST00000409817 MTMR9Q96QG7 549 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 ARHGAP9Q9BRR9 750 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 PSTPIP2Q9H939 334 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 ARHGEF10LQ9HCE6 1279 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 KBTBD4Q9NVX7 518 aa8.43□□□□□ -1.06
CXCR4-202ENST00000409817 BIN2Q9UBW5 565 aaPredicted RBP8.43□□□□□ -1.06
CXCR4-202ENST00000409817 SYNRGQ9UMZ2 1314 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 USP17L10C9JJH3 530 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 F5H6K3 240 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 RPN1P04843 607 aaKnown RBP8.42□□□□□ -1.06
CXCR4-202ENST00000409817 SKILP12757 684 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 ATP1A3P13637 1013 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 POLD1P28340 1107 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 USP11P51784 963 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
CXCR4-202ENST00000409817 KLRC3Q07444 240 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 STIM1Q13586 685 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 KARSQ15046 597 aaKnown RBP8.42□□□□□ -1.06
CXCR4-202ENST00000409817 CALCRLQ16602 461 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 TTBK2Q6IQ55 1244 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 TRAF7Q6Q0C0 670 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 KCTD1Q719H9 257 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 TMC6Q7Z403 805 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 CABP7Q86V35 215 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 CLEC10AQ8IUN9 316 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 VSTM4Q8IW00 320 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 PLPP7Q8NBV4 271 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 AMNQ9BXJ7 453 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 LRRC27Q9C0I9 530 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.42□□□□□ -1.06
CXCR4-202ENST00000409817 ZNF70Q9UC06 446 aaPredicted RBP8.42□□□□□ -1.06
CXCR4-202ENST00000409817 STK17AQ9UEE5 414 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 RWDD2AQ9UIY3 292 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 PCDHAC2Q9Y5I4 1007 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
CXCR4-202ENST00000409817 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 CCP110O43303 1012 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 FOSP01100 380 aaPredicted RBP8.41□□□□□ -1.06
CXCR4-202ENST00000409817 TUBB4AP04350 444 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 BMP3P12645 472 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 LRMPQ12912 555 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 CDC37Q16543 378 aaPredicted RBP8.41□□□□□ -1.06
CXCR4-202ENST00000409817 QRICH1Q2TAL8 776 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 NAALADL2Q58DX5 795 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 DEFB132Q7Z7B7 95 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 SIAH1Q8IUQ4 282 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 ANKRD20A12PQ8NF67 263 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 SLC6A16Q9GZN6 736 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 SH2D4AQ9H788 454 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 ZNF277Q9NRM2 450 aaPredicted RBP8.41□□□□□ -1.06
CXCR4-202ENST00000409817 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 NOVA2Q9UNW9 492 aaKnown RBP8.41□□□□□ -1.06
CXCR4-202ENST00000409817 PCDHA1Q9Y5I3 950 aa8.41□□□□□ -1.06
CXCR4-202ENST00000409817 KIF2AO00139 706 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-202ENST00000409817 PLA2G6O60733 806 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 PPP1R11O60927 126 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-202ENST00000409817 RAD17O75943 681 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 RHOBTB3O94955 611 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 NDUFB10O96000 172 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 GH2P01242 217 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 RPS12P25398 132 aaKnown RBP8.4□□□□□ -1.06
CXCR4-202ENST00000409817 TNNI2P48788 182 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 CCZ1BP86790 482 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 CCZ1P86791 482 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-202ENST00000409817 PAK1Q13153 545 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 PTK7Q13308 1070 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 TNIP1Q15025 636 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 FILIP1LQ4L180 1135 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 COBLL1Q53SF7 1204 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 DALRD3Q5D0E6 543 aaKnown RBP8.4□□□□□ -1.06
CXCR4-202ENST00000409817 TMCO4Q5TGY1 634 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 SYDE2Q5VT97 1194 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 CDKAL1Q5VV42 579 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 PHLDB3Q6NSJ2 640 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 JDP2Q8WYK2 163 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 ZBED3Q96IU2 234 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-202ENST00000409817 C7orf25Q9BPX7 421 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 PDGFDQ9GZP0 370 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-202ENST00000409817 MTFR1LQ9H019 292 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 IL21Q9HBE4 155 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 LRWD1Q9UFC0 647 aa8.4□□□□□ -1.06
CXCR4-202ENST00000409817 CYP3A7-CYP3A51PA0A087WV96 503 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 A0A1B0GTH6 734 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 LRRC10BA6NIK2 292 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L15C9J2P7 530 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L11C9JVI0 530 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms