RNA–Protein interactions for RNA: ENST00000409712.5

SUMO1-209, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-209ENST00000409712 SPATA31C2B4DYI2 1134 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 WNT7AO00755 349 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 SEPT4O43236 478 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 CCND3P30281 292 aaPredicted RBP18.87■□□□□ 0.61
SUMO1-209ENST00000409712 ADCYAP1R1P41586 468 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 TOB1P50616 345 aaPredicted RBP18.87■□□□□ 0.61
SUMO1-209ENST00000409712 NUCB2P80303 420 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 SEMA3FQ13275 785 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 TTLL4Q14679 1199 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 PRR16Q569H4 304 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 TTC38Q5R3I4 469 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 CCDC62Q6P9F0 684 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 ZNF333Q96JL9 665 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 DOCK5Q9H7D0 1870 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 HMX1Q9NP08 348 aaPredicted RBP18.87■□□□□ 0.61
SUMO1-209ENST00000409712 DDX25Q9UHL0 483 aaKnown RBP18.87■□□□□ 0.61
SUMO1-209ENST00000409712 ZDHHC9Q9Y397 364 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 MRVI1Q9Y6F6 885 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 HTTP42858 3142 aa18.87■□□□□ 0.61
SUMO1-209ENST00000409712 DUSP28Q4G0W2 176 aa18.86■□□□□ 0.61
SUMO1-209ENST00000409712 KCNH7Q9NS40 1196 aa18.86■□□□□ 0.61
SUMO1-209ENST00000409712 DDX41Q9UJV9 622 aaKnown RBP18.86■□□□□ 0.61
SUMO1-209ENST00000409712 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.85■□□□□ 0.61
SUMO1-209ENST00000409712 NKRFO15226 690 aaKnown RBP eCLIP18.85■□□□□ 0.61
SUMO1-209ENST00000409712 SLC37A4O43826 429 aa18.85■□□□□ 0.61
SUMO1-209ENST00000409712 MSCO60682 206 aa18.85■□□□□ 0.61
SUMO1-209ENST00000409712 ARIH2O95376 493 aa18.85■□□□□ 0.61
SUMO1-209ENST00000409712 ARP10275 920 aa18.85■□□□□ 0.61
SUMO1-209ENST00000409712 TXNP10599 105 aaKnown RBP18.85■□□□□ 0.61
SUMO1-209ENST00000409712 ATP2B1P20020 1258 aa18.85■□□□□ 0.61
SUMO1-209ENST00000409712 CNGA1P29973 690 aa18.85■□□□□ 0.61
SUMO1-209ENST00000409712 TNFAIP2Q03169 654 aa18.85■□□□□ 0.61
SUMO1-209ENST00000409712 FOXD4L5Q5VV16 416 aaPredicted RBP18.85■□□□□ 0.61
SUMO1-209ENST00000409712 FOXD4L4Q8WXT5 416 aaPredicted RBP18.85■□□□□ 0.61
SUMO1-209ENST00000409712 SENP7Q9BQF6 1050 aa18.85■□□□□ 0.61
SUMO1-209ENST00000409712 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■□□□ 11.5
SUMO1-209ENST00000409712 AGO4Q9HCK5 861 aaKnown RBP18.85■□□□□ 0.61
SUMO1-209ENST00000409712 ADCY6O43306 1168 aa18.84■□□□□ 0.61
SUMO1-209ENST00000409712 KCNA2P16389 499 aa18.84■□□□□ 0.61
SUMO1-209ENST00000409712 SMPD1P17405 629 aa18.84■□□□□ 0.61
SUMO1-209ENST00000409712 UBA1P22314 1058 aaKnown RBP18.84■□□□□ 0.61
SUMO1-209ENST00000409712 MCM7P33993 719 aa18.84■□□□□ 0.61
SUMO1-209ENST00000409712 NBR1Q14596 966 aa18.84■□□□□ 0.61
SUMO1-209ENST00000409712 UNC93B1Q9H1C4 597 aa18.84■□□□□ 0.61
SUMO1-209ENST00000409712 PAK6Q9NQU5 681 aaPredicted RBP18.84■□□□□ 0.61
SUMO1-209ENST00000409712 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.84■□□□□ 0.61
SUMO1-209ENST00000409712 DDX20Q9UHI6 824 aaKnown RBP18.84■□□□□ 0.61
SUMO1-209ENST00000409712 GNEQ9Y223 722 aaKnown RBP18.84■□□□□ 0.61
SUMO1-209ENST00000409712 PCDHB6Q9Y5E3 794 aa18.84■□□□□ 0.61
SUMO1-209ENST00000409712 TBX3O15119 743 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 MSH4O15457 936 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 NEMFO60524 1076 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 DUSP11O75319 330 aaKnown RBP18.83■□□□□ 0.6
SUMO1-209ENST00000409712 CCL5P13501 91 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 SP2Q02086 613 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 NEDD9Q14511 834 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 MTFR1Q15390 333 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 ZNF174Q15697 407 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 LY6KQ17RY6 165 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 GIMAP8Q8ND71 665 aaPredicted RBP18.83■□□□□ 0.6
SUMO1-209ENST00000409712 ETNPPLQ8TBG4 499 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 ZNF577Q9BSK1 485 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 KCNMB3Q9NPA1 279 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 Q9Y3F1 56 aa18.83■□□□□ 0.6
SUMO1-209ENST00000409712 NFASCO94856 1347 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 IPO5O00410 1097 aaKnown RBP18.82■□□□□ 0.6
SUMO1-209ENST00000409712 ATP9AO75110 1047 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 RARBP10826 455 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 TMEM63BQ5T3F8 832 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 FAM173BQ6P4H8 233 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 SLC5A5Q92911 643 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 EMID1Q96A84 441 aaPredicted RBP18.82■□□□□ 0.6
SUMO1-209ENST00000409712 FAM20AQ96MK3 541 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 CHMP5Q9NZZ3 219 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 ATP6V1DQ9Y5K8 247 aa18.82■□□□□ 0.6
SUMO1-209ENST00000409712 GGPS1O95749 300 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 BMP15O95972 392 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 GH1P01241 217 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 ARHGAP1Q07960 439 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 ITGB3BPQ13352 177 aaPredicted RBP18.81■□□□□ 0.6
SUMO1-209ENST00000409712 CALCRLQ16602 461 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 CELF3Q5SZQ8 465 aaKnown RBP18.81■□□□□ 0.6
SUMO1-209ENST00000409712 TLK2Q86UE8 772 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 COPS5Q92905 334 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 LENG1Q96BZ8 264 aaPredicted RBP18.81■□□□□ 0.6
SUMO1-209ENST00000409712 ZNF396Q96N95 335 aaPredicted RBP18.81■□□□□ 0.6
SUMO1-209ENST00000409712 MTMR9Q96QG7 549 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 RIT2Q99578 217 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 RNF208Q9H0X6 261 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 TBC1D22BQ9NU19 505 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
SUMO1-209ENST00000409712 LAD1O00515 517 aa18.8■□□□□ 0.6
SUMO1-209ENST00000409712 FARP2O94887 1054 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-209ENST00000409712 BAG4O95429 457 aaKnown RBP18.8■□□□□ 0.6
SUMO1-209ENST00000409712 NKX3-2P78367 333 aa18.8■□□□□ 0.6
SUMO1-209ENST00000409712 LAMC2Q13753 1193 aa18.8■□□□□ 0.6
SUMO1-209ENST00000409712 GJC2Q5T442 439 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-209ENST00000409712 COL13A1Q5TAT6 717 aaPredicted RBP18.8■□□□□ 0.6
SUMO1-209ENST00000409712 LHX8Q68G74 356 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms