RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CALM2P0DP24 149 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 CALM3P0DP25 149 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 NF2P35240 595 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 NLRP5P59047 1200 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 SEMA3FQ13275 785 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 DRP2Q13474 957 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 ZSCAN10Q96SZ4 725 aaPredicted RBP17.06■□□□□ 0.32
LIMS2-205ENST00000409455 NFU1Q9UMS0 254 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 PLAGL2Q9UPG8 496 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 HMGB1P1B2RPK0 211 aaPredicted RBP17.06■□□□□ 0.32
LIMS2-205ENST00000409455 MDH1P40925 334 aaKnown RBP17.06■□□□□ 0.32
LIMS2-205ENST00000409455 IFT88Q13099 833 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 CD302Q8IX05 232 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 ATP6V1G3Q96LB4 118 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 ERGIC2Q96RQ1 377 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 TMX4Q9H1E5 349 aaPredicted RBP17.06■□□□□ 0.32
LIMS2-205ENST00000409455 POLD4Q9HCU8 107 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 GOLGA6L7A0A1B0GV03 622 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 AKR1B10O60218 316 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 GTF2IP78347 998 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 HDLBPQ00341 1268 aaKnown RBP17.05■□□□□ 0.32
LIMS2-205ENST00000409455 EVX2Q03828 476 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 PREPLQ4J6C6 727 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-205ENST00000409455 CEP85LQ5SZL2 805 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 MREGQ8N565 214 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 IFT81Q8WYA0 676 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 CENPHQ9H3R5 247 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 GDF3Q9NR23 364 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 MCM8Q9UJA3 840 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 TSKSQ9UJT2 592 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-205ENST00000409455 E7EVH7 732 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 HEXIM1O94992 359 aaKnown RBP17.05■□□□□ 0.32
LIMS2-205ENST00000409455 HNRNPH3P31942 346 aaKnown RBP17.05■□□□□ 0.32
LIMS2-205ENST00000409455 CARSP49589 748 aaKnown RBP17.05■□□□□ 0.32
LIMS2-205ENST00000409455 DUSP9Q99956 384 aaKnown RBP17.05■□□□□ 0.32
LIMS2-205ENST00000409455 COA1Q9GZY4 146 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 EPB41L5Q9HCM4 733 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 ATP8A2Q9NTI2 1148 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 ARHGAP20Q9P2F6 1191 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 RNF14Q9UBS8 474 aa17.05■□□□□ 0.32
LIMS2-205ENST00000409455 GOLGA6L10A6NI86 522 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 NCK2O43639 380 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 RASSF9O75901 435 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 GLI1P08151 1106 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 ELF1P32519 619 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 SEC24CP53992 1094 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 GSTO1P78417 241 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 GUCY2DQ02846 1103 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 CCDC121Q6ZUS5 278 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 TMTC3Q6ZXV5 915 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 C1orf131Q8NDD1 294 aaKnown RBP17.04■□□□□ 0.32
LIMS2-205ENST00000409455 P2RX5Q93086 422 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 KLRC4O43908 158 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 LCA5LO95447 670 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 DOK7Q18PE1 504 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 NAALADL2Q58DX5 795 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 STYK1Q6J9G0 422 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 ZSCAN29Q8IWY8 852 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-205ENST00000409455 SH3RF3Q8TEJ3 882 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-205ENST00000409455 CCDC47Q96A33 483 aaKnown RBP17.04■□□□□ 0.32
LIMS2-205ENST00000409455 NOX5Q96PH1 765 aa17.04■□□□□ 0.32
LIMS2-205ENST00000409455 ACTR5Q9H9F9 607 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-205ENST00000409455 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-205ENST00000409455 FAM153BP0C7A2 387 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 CCNE1P24864 410 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 EIF4A3P38919 411 aaKnown RBP17.03■□□□□ 0.32
LIMS2-205ENST00000409455 GUCY2FP51841 1108 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 FAM153CQ494X1 144 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 MIIPQ5JXC2 388 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 ARFGAP2Q8N6H7 521 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 WHAMMQ8TF30 809 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 SLC40A1Q9NP59 571 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 FAM153AQ9UHL3 310 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 LTBP1Q14766 1721 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 MYH10P35580 1976 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 ESYT3A0FGR9 886 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 TMCO5BA8MYB1 307 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 DDAH1O94760 285 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 BAG3O95817 575 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 LDHCP07864 332 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 TROAPQ12815 778 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 ITGB3BPQ13352 177 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-205ENST00000409455 MAATS1Q7Z4T9 603 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 CCDC114Q96M63 670 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 TLR10Q9BXR5 811 aa17.03■□□□□ 0.32
LIMS2-205ENST00000409455 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-205ENST00000409455 CYP2D6P10635 497 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 SCG2P13521 617 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 UBA7P41226 1012 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 MAGEA1P43355 309 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 PPP4CP60510 307 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 PPP4R3AQ6IN85 833 aa17.02■□□□□ 0.32
LIMS2-205ENST00000409455 DTHD1Q6ZMT9 781 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms