RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 CCDC77Q9BR77 488 aa4.17□□□□□ -1.74
RGPD4-201ENST00000408999 NSRP1Q9H0G5 558 aaKnown RBP4.17□□□□□ -1.74
RGPD4-201ENST00000408999 SH3GLB2Q9NR46 395 aa4.17□□□□□ -1.74
RGPD4-201ENST00000408999 ANKFY1Q9P2R3 1169 aa4.17□□□□□ -1.74
RGPD4-201ENST00000408999 MTRF1LQ9UGC7 380 aaKnown RBP4.17□□□□□ -1.74
RGPD4-201ENST00000408999 LNPEPQ9UIQ6 1025 aa4.17□□□□□ -1.74
RGPD4-201ENST00000408999 MYH4Q9Y623 1939 aa4.17□□□□□ -1.74
RGPD4-201ENST00000408999 CHD2O14647 1828 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 PNMA6FA0A0J9YX94 578 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 FOXP2O15409 715 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 PRDX5P30044 214 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 HSPA1LP34931 641 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 TUBP50607 506 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 TUBB4BP68371 445 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CACNB1Q02641 598 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 NR5A1Q13285 461 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CUL4AQ13619 759 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ATG9AQ7Z3C6 839 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ARMC9Q7Z3E5 817 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 U2AF1L4Q8WU68 220 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SREK1Q8WXA9 508 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 LARP4BQ92615 738 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 PLA2G12BQ9BX93 195 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 NLRC4Q9NPP4 1024 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 KIAA1522Q9P206 1035 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 VPS18Q9P253 973 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 MAN1B1Q9UKM7 699 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 UTP11Q9Y3A2 253 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SPATA31A5Q5VU36 1347 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SPATA31A7Q8IWB4 1347 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 NHSQ6T4R5 1651 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 AKAP12Q02952 1782 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 AGPSO00116 658 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SNAP23O00161 211 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ARHGAP6O43182 974 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 STAMBPO95630 424 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 P4HA1P13674 534 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ATP2A2P16615 1042 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 PIK3CAP42336 1068 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 MYL7Q01449 175 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 KCTD2Q14681 263 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SUPT20HL1Q3ZLR7 823 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 C8orf74Q6P047 294 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 C11orf57Q6ZUT1 292 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SYCE1Q8N0S2 351 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CCDC63Q8NA47 563 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 IWS1Q96ST2 819 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 IFIH1Q9BYX4 1025 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 NUCKS1Q9H1E3 243 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 PCDHB6Q9Y5E3 794 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 MEIS1O00470 390 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 TNNC2P02585 160 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CNGA1P29973 690 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CDC25BP30305 580 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 HOXA13P31271 388 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SNX16P57768 344 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 YWHAEP62258 255 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 EN1Q05925 392 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 MKRN3Q13064 507 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CALCOCO2Q13137 446 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ADAM9Q13443 819 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 TUBB2AQ13885 445 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 BARGINQ6ZT62 677 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 HDXQ7Z353 690 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 FAM178BQ8IXR5 827 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CCDC51Q96ER9 411 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CNOT6LQ96LI5 555 aaKnown RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 AK8Q96MA6 479 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 AIFM3Q96NN9 605 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 TUBB2BQ9BVA1 445 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ZNF341Q9BYN7 854 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CUEDC2Q9H467 287 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CD209Q9NNX6 404 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ZNF277Q9NRM2 450 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 FANCLQ9NW38 375 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SSX2IPQ9Y2D8 614 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 COL4A3BPQ9Y5P4 624 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CCDC88AQ3V6T2 1871 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 H0YCG3 227 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 CAMTA2O94983 1202 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 NFIXQ14938 502 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 PSME4Q14997 1843 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 TXNRD1Q16881 649 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 FAM47CQ5HY64 1035 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ZNF658Q5TYW1 1059 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SPATA1Q5VX52 437 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 E4F1Q66K89 784 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 TLDC1Q6P9B6 456 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 MB21D2Q8IYB1 491 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 SMYD4Q8IYR2 804 aaPredicted RBP4.16□□□□□ -1.74
RGPD4-201ENST00000408999 LINC00301Q8NCQ3 95 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 MYO3BQ8WXR4 1341 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 ERO1AQ96HE7 468 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 MED10Q9BTT4 135 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 LY9Q9HBG7 655 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 NRBP2Q9NSY0 501 aa4.16□□□□□ -1.74
RGPD4-201ENST00000408999 MEGF6O75095 1541 aa4.15□□□□□ -1.74
RGPD4-201ENST00000408999 E7EVH7 732 aa4.15□□□□□ -1.74
RGPD4-201ENST00000408999 ATP2C2O75185 946 aa4.15□□□□□ -1.74
RGPD4-201ENST00000408999 SPATA31D3P0C874 917 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms