RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TMEM265A0A087WTH1 108 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 F5H6K3 240 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 BIN1O00499 593 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 POLR2DO15514 142 aaKnown RBP14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 PLEKHA8P1O95397 391 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 SERPINC1P01008 464 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 ERCC5P28715 1186 aaPredicted RBP14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 SMAD3P84022 425 aaKnown RBP14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 FANCCQ00597 558 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 KLRC3Q07444 240 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 NR5A1Q13285 461 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 TJAP1Q5JTD0 557 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 KIAA1755Q5JYT7 1200 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 SPICE1Q8N0Z3 855 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 SRBD1Q8N5C6 995 aaKnown RBP14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 PPM1EQ8WY54 764 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 LPAR1Q92633 364 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 GTPBP4Q9BZE4 634 aaKnown RBP14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 FLRT1Q9NZU1 646 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 PYCARDQ9ULZ3 195 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 SYNPO2Q9UMS6 1093 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 PCDHA5Q9Y5H7 936 aa14.54□□□□□ -0.08
SMARCB1-203ENST00000407082 hCG_1984214I3L0E3 225 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 DNM1LO00429 736 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 LAD1O00515 517 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 MSCO60682 206 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 SLFN14P0C7P3 912 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 SFPQP23246 707 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 CYP2C19P33261 490 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 GTF2F1P35269 517 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 UBASH3AP57075 661 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 PNOCQ13519 176 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 TPD52L1Q16890 204 aaPredicted RBP14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 SLC39A5Q6ZMH5 540 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 BLIDQ8IZY5 108 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 CMTR1Q8N1G2 835 aaKnown RBP14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 ZNF713Q8N859 430 aaPredicted RBP14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 IQUBQ8NA54 791 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 DAGLBQ8NCG7 672 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 GMCL1P1Q8NEA9 526 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 ENOX1Q8TC92 643 aaKnown RBP14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 C12orf42Q96LP6 360 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 GSDMAQ96QA5 445 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 IFNKQ9P0W0 207 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 MTMR7Q9Y216 660 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 MYH4Q9Y623 1939 aa14.53□□□□□ -0.08
SMARCB1-203ENST00000407082 KBTBD13C9JR72 458 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 NDUFB10O96000 172 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 SKILP12757 684 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 VCAM1P19320 739 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 ATP2B1P20020 1258 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 LONP1P36776 959 aaKnown RBP14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 SARSP49591 514 aaKnown RBP14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 CCNA1P78396 465 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 ATP2C1P98194 919 aaPredicted RBP14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 ORC2Q13416 577 aaPredicted RBP14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 TRIM60Q495X7 471 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 SLFN13Q68D06 897 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 ARRDC4Q8NCT1 418 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 OXER1Q8TDS5 423 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 GTF3C2Q8WUA4 911 aaPredicted RBP14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 CACTINQ8WUQ7 758 aaKnown RBP14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 XPO4Q9C0E2 1151 aaKnown RBP14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 CSRNP2Q9H175 543 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 RMND1Q9NWS8 449 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 SERTAD1Q9UHV2 236 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 NRBP1Q9UHY1 535 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 PCDHA4Q9UN74 947 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 IVNS1ABPQ9Y6Y0 642 aa14.52□□□□□ -0.09
SMARCB1-203ENST00000407082 LAMA2P24043 3122 aaKnown RBP14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 CCDC194A0A1B0GVG4 234 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 CDK11BP21127 795 aaKnown RBP14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 GNA11P29992 359 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 MORC3Q14149 939 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 NCAPHQ15003 741 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 SH3RF1Q7Z6J0 888 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 FILIP1Q7Z7B0 1213 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 USP38Q8NB14 1042 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 TNFRSF25Q93038 417 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 FAM122AQ96E09 287 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 RNPC3Q96LT9 517 aaKnown RBP14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 RPAP3Q9H6T3 665 aaPredicted RBP14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 MAN1B1Q9UKM7 699 aa14.51□□□□□ -0.09
SMARCB1-203ENST00000407082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 SLC15A5A6NIM6 579 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L15C9J2P7 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L13C9JLJ4 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L11C9JVI0 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L18D6R9N7 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L22D6RA61 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L17D6RBQ6 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L19D6RCP7 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L20D6RJB6 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 WDR46O15213 610 aaKnown RBP14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 ACTN4O43707 911 aaKnown RBP14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 MYL1P05976 194 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 ADCYAP1R1P41586 468 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 SLC1A4P43007 532 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 USP17L24Q0WX57 530 aa14.5□□□□□ -0.09
SMARCB1-203ENST00000407082 GRIN2CQ14957 1233 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms