RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 TBC1D16Q8TBP0 767 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 SPZ1Q9BXG8 430 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 HAUS4Q9H6D7 363 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-206ENST00000405546 ROBO1Q9Y6N7 1651 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 GPR75-ASB3A0A0A6YYF3 556 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 NCK2O43639 380 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 WDR93Q6P2C0 686 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 CCNI2Q6ZMN8 369 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-206ENST00000405546 CCDC155Q8N6L0 562 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 AK8Q96MA6 479 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 SCLT1Q96NL6 688 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 CACNA1SQ13698 1873 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 MYMKA6NI61 221 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 PDHBP11177 359 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 CHRM1P11229 460 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-206ENST00000405546 RDXP35241 583 aaKnown RBP16.6■□□□□ 0.25
ATG4B-206ENST00000405546 EPS15P42566 896 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 HERVK_113P62684 666 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 PPP2R5AQ15172 486 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 CAPN11Q9UMQ6 739 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L15C9J2P7 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L13C9JLJ4 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L11C9JVI0 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L18D6R9N7 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L22D6RA61 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L17D6RBQ6 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L19D6RCP7 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L20D6RJB6 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 EIF3HO15372 352 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATG4B-206ENST00000405546 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L24Q0WX57 530 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 TMED8Q6PL24 325 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 GLIS3Q8NEA6 775 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 LRP5O75197 1615 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 RPSAP08865 295 aaKnown RBP16.59■□□□□ 0.25
ATG4B-206ENST00000405546 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 DDX12PQ92771 950 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 MLXIPQ9HAP2 919 aa16.59■□□□□ 0.25
ATG4B-206ENST00000405546 PPANQ9NQ55 473 aaKnown RBP16.59■□□□□ 0.25
ATG4B-206ENST00000405546 USP17L10C9JJH3 530 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 TTMPQ5BVD1 217 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 WDR59Q6PJI9 974 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 KIAA0825Q8IV33 1275 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 ANKS1AQ92625 1134 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 N4BP2L2Q92802 583 aaPredicted RBP16.58■□□□□ 0.25
ATG4B-206ENST00000405546 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.252e-6■■□□□ 11.6
ATG4B-206ENST00000405546 CEP89Q96ST8 783 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.58■□□□□ 0.25
ATG4B-206ENST00000405546 MTMR4Q9NYA4 1195 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 SERPINB13Q9UIV8 391 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 PCDHA12Q9UN75 941 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 TIAM2Q8IVF5 1701 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 ECM29Q5VYK3 1845 aa16.58■□□□□ 0.25
ATG4B-206ENST00000405546 M0R2N6 131 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 GRIN2DO15399 1336 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 PDS5AQ29RF7 1337 aaKnown RBP16.58■□□□□ 0.24
ATG4B-206ENST00000405546 DDX60Q8IY21 1712 aaKnown RBP16.58■□□□□ 0.24
ATG4B-206ENST00000405546 USO1O60763 962 aaKnown RBP16.58■□□□□ 0.24
ATG4B-206ENST00000405546 CPP00450 1065 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 SRGNP10124 158 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 PRPHP41219 470 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 AARSP49588 968 aaKnown RBP eCLIP16.58■□□□□ 0.24
ATG4B-206ENST00000405546 NFRKBQ6P4R8 1299 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 ADGRF4Q8IZF3 695 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 TSG101Q99816 390 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 IFIH1Q9BYX4 1025 aaKnown RBP16.58■□□□□ 0.24
ATG4B-206ENST00000405546 SEMA6BQ9H3T3 888 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.24
ATG4B-206ENST00000405546 DDX25Q9UHL0 483 aaKnown RBP16.58■□□□□ 0.24
ATG4B-206ENST00000405546 RHBDL3P58872 404 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 ZBED6P86452 979 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 USH1GQ495M9 461 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 CCDC181Q5TID7 509 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 KIAA0895Q8NCT3 520 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 NOC3LQ8WTT2 800 aaKnown RBP16.57■□□□□ 0.24
ATG4B-206ENST00000405546 TBC1D22AQ8WUA7 517 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 NUP58Q9BVL2 599 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 NDST4Q9H3R1 872 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 NHSL1Q5SYE7 1610 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 EP400Q96L91 3159 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 HERC4Q5GLZ8 1057 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-206ENST00000405546 DAGLBQ8NCG7 672 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 MS4A14Q96JA4 679 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 MMTAG2Q9BU76 263 aaKnown RBP16.57■□□□□ 0.24
ATG4B-206ENST00000405546 BCCIPQ9P287 314 aaKnown RBP eCLIP16.57■□□□□ 0.24
ATG4B-206ENST00000405546 KIAA1024Q9UPX6 916 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 MRPL12P52815 198 aaKnown RBP16.57■□□□□ 0.24
ATG4B-206ENST00000405546 GRB10Q13322 594 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 CABS1Q96KC9 395 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 CUEDC2Q9H467 287 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
ATG4B-206ENST00000405546 BUB1O43683 1085 aa16.56■□□□□ 0.24
ATG4B-206ENST00000405546 BBOX1O75936 387 aa16.56■□□□□ 0.24
ATG4B-206ENST00000405546 TRIM37O94972 964 aa16.56■□□□□ 0.24
ATG4B-206ENST00000405546 MYL1P05976 194 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms