RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 EIF4ENIF1Q9NRA8 985 aaKnown RBP37.76■■■■□ 3.63
CSNK1E-204ENST00000403904 PRKAR2AP13861 404 aaKnown RBP37.75■■■■□ 3.63
CSNK1E-204ENST00000403904 SETQ01105 290 aaPredicted RBP37.75■■■■□ 3.63
CSNK1E-204ENST00000403904 CEBPZQ03701 1054 aaKnown RBP37.75■■■■□ 3.63
CSNK1E-204ENST00000403904 TRPV1Q8NER1 839 aa37.75■■■■□ 3.63
CSNK1E-204ENST00000403904 USP28Q96RU2 1077 aa37.75■■■■□ 3.63
CSNK1E-204ENST00000403904 TFIP11Q9UBB9 837 aaKnown RBP37.75■■■■□ 3.63
CSNK1E-204ENST00000403904 ATP6V1DQ9Y5K8 247 aa37.75■■■■□ 3.63
CSNK1E-204ENST00000403904 FIBPO43427 364 aa37.74■■■■□ 3.63
CSNK1E-204ENST00000403904 NEMFO60524 1076 aa37.74■■■■□ 3.63
CSNK1E-204ENST00000403904 INHAP05111 366 aa37.74■■■■□ 3.63
CSNK1E-204ENST00000403904 DNM1Q05193 864 aaKnown RBP37.74■■■■□ 3.63
CSNK1E-204ENST00000403904 CLIC4Q9Y696 253 aa37.74■■■■□ 3.63
CSNK1E-204ENST00000403904 MRVI1Q9Y6F6 885 aa37.74■■■■□ 3.63
CSNK1E-204ENST00000403904 SPATA31C2B4DYI2 1134 aa37.73■■■■□ 3.63
CSNK1E-204ENST00000403904 CYBAP13498 195 aa37.73■■■■□ 3.63
CSNK1E-204ENST00000403904 ADCYAP1R1P41586 468 aa37.73■■■■□ 3.63
CSNK1E-204ENST00000403904 CCDC144BQ3MJ40 725 aa37.73■■■■□ 3.63
CSNK1E-204ENST00000403904 FBXO46Q6PJ61 603 aaPredicted RBP37.73■■■■□ 3.63
CSNK1E-204ENST00000403904 SCFD2Q8WU76 684 aa37.73■■■■□ 3.63
CSNK1E-204ENST00000403904 ZNF396Q96N95 335 aaPredicted RBP37.73■■■■□ 3.63
CSNK1E-204ENST00000403904 PKD2L1Q9P0L9 805 aa37.73■■■■□ 3.63
CSNK1E-204ENST00000403904 ICAM3P32942 547 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 SF3A1Q15459 793 aaKnown RBP37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 PKN2Q16513 984 aaKnown RBP37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 CDHR1Q96JP9 859 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 TMEM60Q9H2L4 133 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 NRBP1Q9UHY1 535 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 RBM47A0AV96 593 aaKnown RBP37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 MSH4O15457 936 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 MAFGO15525 162 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 ARIH2O95376 493 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 ORC2Q13416 577 aaPredicted RBP37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 SLC9C1Q4G0N8 1177 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 TMEM63BQ5T3F8 832 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 ANO1Q5XXA6 986 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 GJA10Q969M2 543 aa37.72■■■■□ 3.63
CSNK1E-204ENST00000403904 TCHHQ07283 1943 aa37.71■■■■□ 3.63
CSNK1E-204ENST00000403904 ATP9AO75110 1047 aa37.71■■■■□ 3.63
CSNK1E-204ENST00000403904 SP2Q02086 613 aa37.71■■■■□ 3.63
CSNK1E-204ENST00000403904 MAP3K21Q5TCX8 1036 aa37.71■■■■□ 3.63
CSNK1E-204ENST00000403904 AGO4Q9HCK5 861 aaKnown RBP37.71■■■■□ 3.63
CSNK1E-204ENST00000403904 C11orf97A0A1B0GVM6 126 aaPredicted RBP37.7■■■■□ 3.63
CSNK1E-204ENST00000403904 PTGDRQ13258 359 aa37.7■■■■□ 3.63
CSNK1E-204ENST00000403904 TTLL4Q14679 1199 aa37.7■■■■□ 3.63
CSNK1E-204ENST00000403904 CALCRLQ16602 461 aa37.7■■■■□ 3.63
CSNK1E-204ENST00000403904 LY6KQ17RY6 165 aa37.7■■■■□ 3.63
CSNK1E-204ENST00000403904 ETNPPLQ8TBG4 499 aa37.7■■■■□ 3.63
CSNK1E-204ENST00000403904 ZNF577Q9BSK1 485 aa37.7■■■■□ 3.63
CSNK1E-204ENST00000403904 DDX41Q9UJV9 622 aaKnown RBP37.7■■■■□ 3.63
CSNK1E-204ENST00000403904 TXNP10599 105 aaKnown RBP37.69■■■■□ 3.62
CSNK1E-204ENST00000403904 TGFB3P10600 412 aa37.69■■■■□ 3.62
CSNK1E-204ENST00000403904 CNGA1P29973 690 aa37.69■■■■□ 3.62
CSNK1E-204ENST00000403904 CCDC62Q6P9F0 684 aa37.69■■■■□ 3.62
CSNK1E-204ENST00000403904 KCNV1Q6PIU1 500 aa37.69■■■■□ 3.62
CSNK1E-204ENST00000403904 C4orf32Q8N8J7 132 aa37.69■■■■□ 3.62
CSNK1E-204ENST00000403904 KCNMB3Q9NPA1 279 aa37.69■■■■□ 3.62
CSNK1E-204ENST00000403904 DOCK5Q9H7D0 1870 aa37.69■■■■□ 3.62
CSNK1E-204ENST00000403904 CCND3P30281 292 aaPredicted RBP37.68■■■■□ 3.62
CSNK1E-204ENST00000403904 IQSEC1Q6DN90 963 aa37.68■■■■□ 3.62
CSNK1E-204ENST00000403904 HAS1Q92839 578 aa37.68■■■■□ 3.62
CSNK1E-204ENST00000403904 IPO5O00410 1097 aaKnown RBP37.68■■■■□ 3.62
CSNK1E-204ENST00000403904 TNPO1Q92973 898 aaKnown RBP37.68■■■■□ 3.62
CSNK1E-204ENST00000403904 POLR3EQ9NVU0 708 aa37.68■■■■□ 3.62
CSNK1E-204ENST00000403904 BRCA2P51587 3418 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 ADCY6O43306 1168 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 MARCH6O60337 910 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 KCNA2P16389 499 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 PTGS1P23219 599 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 ITGB3BPQ13352 177 aaPredicted RBP37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 ATL3Q6DD88 541 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 MTMR9Q96QG7 549 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 BCAS3Q9H6U6 928 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 FAM184BQ9ULE4 1060 aa37.67■■■■□ 3.62
CSNK1E-204ENST00000403904 SMPD1P17405 629 aa37.66■■■■□ 3.62
CSNK1E-204ENST00000403904 NCLP19338 710 aaKnown RBP37.66■■■■□ 3.62
CSNK1E-204ENST00000403904 UBA1P22314 1058 aaKnown RBP37.66■■■■□ 3.62
CSNK1E-204ENST00000403904 TNFAIP2Q03169 654 aa37.66■■■■□ 3.62
CSNK1E-204ENST00000403904 GJC2Q5T442 439 aaPredicted RBP37.66■■■■□ 3.62
CSNK1E-204ENST00000403904 COPS5Q92905 334 aa37.66■■■■□ 3.62
CSNK1E-204ENST00000403904 CEP131Q9UPN4 1083 aa37.66■■■■□ 3.62
CSNK1E-204ENST00000403904 TBX3O15119 743 aa37.65■■■■□ 3.62
CSNK1E-204ENST00000403904 SORBS3O60504 671 aa37.65■■■■□ 3.62
CSNK1E-204ENST00000403904 PTPAQ15257 358 aa37.65■■■■□ 3.62
CSNK1E-204ENST00000403904 SLC5A5Q92911 643 aa37.65■■■■□ 3.62
CSNK1E-204ENST00000403904 CFAP45Q9UL16 551 aa37.65■■■■□ 3.62
CSNK1E-204ENST00000403904 OR52Z1P0C646 297 aa37.64■■■■□ 3.62
CSNK1E-204ENST00000403904 AKR1A1P14550 325 aa37.64■■■■□ 3.62
CSNK1E-204ENST00000403904 NASPP49321 788 aaPredicted RBP37.64■■■■□ 3.62
CSNK1E-204ENST00000403904 ATP2C1P98194 919 aaPredicted RBP37.64■■■■□ 3.62
CSNK1E-204ENST00000403904 DUSP28Q4G0W2 176 aa37.64■■■■□ 3.62
CSNK1E-204ENST00000403904 FAM20AQ96MK3 541 aa37.64■■■■□ 3.62
CSNK1E-204ENST00000403904 SENP7Q9BQF6 1050 aa37.64■■■■□ 3.62
CSNK1E-204ENST00000403904 SEPT4O43236 478 aa37.63■■■■□ 3.62
CSNK1E-204ENST00000403904 BAG4O95429 457 aaKnown RBP37.63■■■■□ 3.62
CSNK1E-204ENST00000403904 KRT85P78386 507 aa37.63■■■■□ 3.62
CSNK1E-204ENST00000403904 LENG1Q96BZ8 264 aaPredicted RBP37.63■■■■□ 3.62
CSNK1E-204ENST00000403904 BMP15O95972 392 aa37.63■■■■□ 3.61
CSNK1E-204ENST00000403904 TXKP42681 527 aa37.63■■■■□ 3.61
CSNK1E-204ENST00000403904 HMX1Q9NP08 348 aaPredicted RBP37.63■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 634.3 ms