RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
ATG4B-202ENST00000400771 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.44
ATG4B-202ENST00000400771 TRMT13Q9NUP7 481 aaKnown RBP17.77■□□□□ 0.44
ATG4B-202ENST00000400771 BARHL2Q9NY43 387 aa17.77■□□□□ 0.44
ATG4B-202ENST00000400771 CHD9Q3L8U1 2897 aa17.77■□□□□ 0.43
ATG4B-202ENST00000400771 ADAMTS3O15072 1205 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 TLR3O15455 904 aaKnown RBP17.76■□□□□ 0.43
ATG4B-202ENST00000400771 SORBS3O60504 671 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 STAM2O75886 525 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 F2P00734 622 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 ZNF286BP0CG31 522 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 FPGSQ05932 587 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 HSDL1Q3SXM5 330 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 CELF3Q5SZQ8 465 aaKnown RBP17.76■□□□□ 0.43
ATG4B-202ENST00000400771 MFSD5Q6N075 450 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 CUL5Q93034 780 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 IL17RAQ96F46 866 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 PPP1R12CQ9BZL4 782 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 TELO2Q9Y4R8 837 aa17.76■□□□□ 0.43
ATG4B-202ENST00000400771 V9GY48 417 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-202ENST00000400771 HAS3O00219 553 aa17.75■□□□□ 0.43
ATG4B-202ENST00000400771 KPNA6O60684 536 aa17.75■□□□□ 0.43
ATG4B-202ENST00000400771 TGFB3P10600 412 aa17.75■□□□□ 0.43
ATG4B-202ENST00000400771 PDIA3P30101 505 aaKnown RBP17.75■□□□□ 0.43
ATG4B-202ENST00000400771 CLK2P49760 499 aaKnown RBP17.75■□□□□ 0.43
ATG4B-202ENST00000400771 NAPAP54920 295 aa17.75■□□□□ 0.43
ATG4B-202ENST00000400771 FGD1P98174 961 aa17.75■□□□□ 0.43
ATG4B-202ENST00000400771 PFKFB3Q16875 520 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-202ENST00000400771 BRDTQ58F21 947 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-202ENST00000400771 NFRKBQ6P4R8 1299 aa17.75■□□□□ 0.43
ATG4B-202ENST00000400771 KCNV1Q6PIU1 500 aa17.75■□□□□ 0.43
ATG4B-202ENST00000400771 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
ATG4B-202ENST00000400771 RIC8AQ9NPQ8 531 aa17.75■□□□□ 0.43
ATG4B-202ENST00000400771 NAP1L2Q9ULW6 460 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-202ENST00000400771 COL6A3P12111 3177 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 SPATA31C2B4DYI2 1134 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 FIBPO43427 364 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 SCG2P13521 617 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 ITGB5P18084 799 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 CYP2C18P33260 490 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 LAMC2Q13753 1193 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 XRRA1Q6P2D8 792 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 C16orf59Q7L2K0 433 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 SESTD1Q86VW0 696 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 DHX37Q8IY37 1157 aaKnown RBP17.74■□□□□ 0.43
ATG4B-202ENST00000400771 PHKBQ93100 1093 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 PGBD1Q96JS3 809 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 HIPK3Q9H422 1215 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 RTEL1Q9NZ71 1219 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 UBIAD1Q9Y5Z9 338 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 MICAL3Q7RTP6 2002 aa17.74■□□□□ 0.43
ATG4B-202ENST00000400771 ESYT2A0FGR8 921 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 CYP2C9P11712 490 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 CSF2RAP15509 400 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 ADCY7P51828 1080 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 DGKDQ16760 1214 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 GNPTABQ3T906 1256 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 TEX2Q8IWB9 1127 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 SPATA33Q96N06 139 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 ANO3Q9BYT9 981 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 CYP46A1Q9Y6A2 500 aa17.73■□□□□ 0.43
ATG4B-202ENST00000400771 MYH9P35579 1960 aaKnown RBP17.73■□□□□ 0.43
ATG4B-202ENST00000400771 LOXHD1Q8IVV2 1947 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 CCDC196A0A1B0GTZ2 297 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 PRPF3O43395 683 aaKnown RBP17.72■□□□□ 0.43
ATG4B-202ENST00000400771 PPFIA3O75145 1194 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 SEC24BO95487 1268 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 KCNA2P16389 499 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 IFNAR1P17181 557 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 PTPN11Q06124 597 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-202ENST00000400771 HIC1Q14526 733 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 GDF6Q6KF10 455 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-202ENST00000400771 METTL7BQ6UX53 244 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 CRYGNQ8WXF5 182 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 GPRASP2Q96D09 838 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.72■□□□□ 0.437e-7■□□□□ 10.9
ATG4B-202ENST00000400771 LARP6Q9BRS8 491 aaKnown RBP17.72■□□□□ 0.43
ATG4B-202ENST00000400771 C16orf70Q9BSU1 422 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-202ENST00000400771 TMEM260Q9NX78 707 aa17.72■□□□□ 0.43
ATG4B-202ENST00000400771 SPDYE3A6NKU9 549 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 ATP9AO75110 1047 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 PSEN2P49810 448 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 ANAPC15P60006 121 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
ATG4B-202ENST00000400771 MFSD10Q14728 455 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 FAM47CQ5HY64 1035 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 RASIP1Q5U651 963 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 DHX38Q92620 1227 aaKnown RBP17.71■□□□□ 0.43
ATG4B-202ENST00000400771 GPR20Q99678 358 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 ZMYND12Q9H0C1 365 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 GTF2IRD1Q9UHL9 959 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 CHD7Q9P2D1 2997 aa17.71■□□□□ 0.43
ATG4B-202ENST00000400771 SMCO2A6NFE2 343 aa17.7■□□□□ 0.42
ATG4B-202ENST00000400771 LGALS2P05162 132 aa17.7■□□□□ 0.42
ATG4B-202ENST00000400771 HOXC8P31273 242 aa17.7■□□□□ 0.42
ATG4B-202ENST00000400771 SREBF1P36956 1147 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms