RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ANKRD20A3Q5VUR7 823 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 RABGGTAQ92696 567 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 MIS18BP1Q6P0N0 1132 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 GOLGA8KD6RF30 607 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 RNF40O75150 1001 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 ATF2P15336 505 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 PHBP35232 272 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 HOMER3Q9NSC5 361 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 ADD3Q9UEY8 706 aaKnown RBP19.82■□□□□ 0.76
COL18A1-204ENST00000400337 CCDC13Q8IYE1 715 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 ABL1P00519 1130 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 CYP19A1P11511 503 aaPredicted RBP19.81■□□□□ 0.76
COL18A1-204ENST00000400337 MASTLQ96GX5 879 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 THAP9Q9H5L6 903 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 TMEM206Q9H813 350 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 PARVGQ9HBI0 331 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 AKT3Q9Y243 479 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 GCNT4Q9P109 453 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 MKRN1Q9UHC7 482 aaKnown RBP19.81■□□□□ 0.76
COL18A1-204ENST00000400337 ALKQ9UM73 1620 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 CCNA1P78396 465 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 HAUS1Q96CS2 278 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 PTPN22Q9Y2R2 807 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 CDC42BPAQ5VT25 1732 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 ZNF653Q96CK0 615 aa19.81■□□□□ 0.76
COL18A1-204ENST00000400337 CDHR2Q9BYE9 1310 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 SYNJ2BP-COX16A0A087WUM0 186 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 CCND2P30279 289 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 CPVLQ9H3G5 476 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 COX16Q9P0S2 106 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 COL15A1P39059 1388 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 GFPT2O94808 682 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 GH2P01242 217 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 RESP18Q5W5W9 173 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 EEPD1Q7L9B9 569 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 RILPQ96NA2 401 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 TYW1Q9NV66 732 aaKnown RBP19.8■□□□□ 0.76
COL18A1-204ENST00000400337 HAUS2Q9NVX0 235 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 SEPT10Q9P0V9 454 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 CD2APQ9Y5K6 639 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 PASKQ96RG2 1323 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 PSMD2Q13200 908 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 NAA25Q14CX7 972 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 MAGOHBQ96A72 148 aaKnown RBP19.8■□□□□ 0.76
COL18A1-204ENST00000400337 CDHR1Q96JP9 859 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 USP17L5A8MUK1 530 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 EIF2AK2P19525 551 aaKnown RBP19.8■□□□□ 0.76
COL18A1-204ENST00000400337 ZBED6P86452 979 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 TBC1D9BQ66K14 1250 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 TMEM47Q9BQJ4 181 aa19.8■□□□□ 0.76
COL18A1-204ENST00000400337 NMT2O60551 498 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 CTTNQ14247 550 aaKnown RBP19.79■□□□□ 0.76
COL18A1-204ENST00000400337 TMEM179Q6ZVK1 233 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 SH3GLB2Q9NR46 395 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 SEPT2Q15019 361 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 MTERF2Q49AM1 385 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 FAM160B2Q86V87 743 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 JPH2Q9BR39 696 aaPredicted RBP19.79■□□□□ 0.76
COL18A1-204ENST00000400337 TLR3O15455 904 aaKnown RBP19.79■□□□□ 0.76
COL18A1-204ENST00000400337 EIF4A3P38919 411 aaKnown RBP19.79■□□□□ 0.76
COL18A1-204ENST00000400337 ISCA1Q9BUE6 129 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 PDE11AQ9HCR9 933 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 SPTLC3Q9NUV7 552 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 C21orf2O43822 256 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 ZSCAN26Q16670 478 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 CIAPIN1Q6FI81 312 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 NME8Q8N427 588 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 BHMT2Q9H2M3 363 aa19.79■□□□□ 0.76
COL18A1-204ENST00000400337 NHEJ1Q9H9Q4 299 aaPredicted RBP19.79■□□□□ 0.76
COL18A1-204ENST00000400337 ZMYND10O75800 440 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 PTPREP23469 700 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 SLC44A5Q8NCS7 719 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 NDST4Q9H3R1 872 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 CD209Q9NNX6 404 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 PCK1P35558 622 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 CACNA2D3Q8IZS8 1091 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 TTLL6Q8N841 843 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 ANKRD36BP1Q96IX9 119 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 ATF5Q9Y2D1 282 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-204ENST00000400337 CXCR5P32302 372 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 MB21D2Q8IYB1 491 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-204ENST00000400337 ENAHQ8N8S7 591 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-204ENST00000400337 UBE2TQ9NPD8 197 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-204ENST00000400337 DCP1AQ9NPI6 582 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-204ENST00000400337 GDAQ9Y2T3 454 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 RNF17Q9BXT8 1623 aaKnown RBP19.78■□□□□ 0.76
COL18A1-204ENST00000400337 MAPK4P31152 587 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 TCP11X2Q5H9J9 407 aa19.78■□□□□ 0.76
COL18A1-204ENST00000400337 OSBPP22059 807 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 DDIT3P35638 169 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 CRKP46108 304 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 NT5C2P49902 561 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 TTBK2Q6IQ55 1244 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 ZNF341Q9BYN7 854 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 RIPOR2Q9Y4F9 1068 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 AFG3L2Q9Y4W6 797 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 H7C0C1 242 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 MOCS3O95396 460 aa19.77■□□□□ 0.76
COL18A1-204ENST00000400337 FTCDO95954 541 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms