RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 BRDTQ58F21 947 aaPredicted RBP8.57□□□□□ -1.04
USP16-204ENST00000399976 RILPL1Q5EBL4 403 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 ZNF746Q6NUN9 644 aaPredicted RBP8.57□□□□□ -1.04
USP16-204ENST00000399976 METTL7BQ6UX53 244 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 NEK8Q86SG6 692 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 NEK9Q8TD19 979 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 AFAP1L1Q8TED9 768 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 KCNMB3Q9NPA1 279 aa8.57□□□□□ -1.04
USP16-204ENST00000399976 COL1A2P08123 1366 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 CTAGE5O15320 804 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 LGR5O75473 907 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 KCNA2P16389 499 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 GJB2P29033 226 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 HOXC8P31273 242 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 SFNP31947 248 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 TNFAIP2Q03169 654 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 CCDC144BQ3MJ40 725 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 CELF3Q5SZQ8 465 aaKnown RBP8.56□□□□□ -1.04
USP16-204ENST00000399976 RNF180Q86T96 592 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 NOSTRINQ8IVI9 506 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 SLFN12Q8IYM2 578 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 TBC1D5Q92609 795 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 LENG9Q96B70 501 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 KATNAL1Q9BW62 490 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
USP16-204ENST00000399976 NOL7Q9UMY1 257 aaKnown RBP8.56□□□□□ -1.04
USP16-204ENST00000399976 MROH7Q68CQ1 1323 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 SYNRGQ9UMZ2 1314 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 CCDC194A0A1B0GVG4 234 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 JAK2O60674 1132 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 ELNP15502 786 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 DDIT3P35638 169 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 KRT76Q01546 638 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 ARHGAP1Q07960 439 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 USP17L6PQ6QN14 398 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 DIS3L2Q8IYB7 885 aaKnown RBP8.56□□□□□ -1.04
USP16-204ENST00000399976 WDR11Q9BZH6 1224 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 AGO4Q9HCK5 861 aaKnown RBP8.56□□□□□ -1.04
USP16-204ENST00000399976 SIP14410 1827 aa8.56□□□□□ -1.04
USP16-204ENST00000399976 EDIL3O43854 480 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 RBL2Q08999 1139 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 SEMA3FQ13275 785 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
USP16-204ENST00000399976 ARL6IP4Q66PJ3 421 aaKnown RBP8.55□□□□□ -1.04
USP16-204ENST00000399976 RAB11FIP4Q86YS3 637 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 ETNPPLQ8TBG4 499 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 TNPO1Q92973 898 aaKnown RBP8.55□□□□□ -1.04
USP16-204ENST00000399976 TOX2Q96NM4 488 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 UNC93B1Q9H1C4 597 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 HAS3O00219 553 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 DKC1O60832 514 aaKnown RBP eCLIP8.55□□□□□ -1.04
USP16-204ENST00000399976 CAND2O75155 1236 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 PPFIA4O75335 1185 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 SMPD1P17405 629 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 ITGB5P18084 799 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 CCND3P30281 292 aaPredicted RBP8.55□□□□□ -1.04
USP16-204ENST00000399976 MNX1P50219 401 aaPredicted RBP8.55□□□□□ -1.04
USP16-204ENST00000399976 PPP2R5CQ13362 524 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 MTMR1Q13613 665 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 TNS4Q8IZW8 715 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 U2AF1L4Q8WU68 220 aaKnown RBP8.55□□□□□ -1.04
USP16-204ENST00000399976 COL4A6Q14031 1691 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 EIF2AK2P19525 551 aaKnown RBP8.55□□□□□ -1.04
USP16-204ENST00000399976 HOXA13P31271 388 aaPredicted RBP8.55□□□□□ -1.04
USP16-204ENST00000399976 CYP2C19P33261 490 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 JAK3P52333 1124 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 UBE2SQ16763 222 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 PLPPR4Q7Z2D5 763 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 IL31RAQ8NI17 732 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 TBCKQ8TEA7 893 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 AP5M1Q9H0R1 490 aa8.55□□□□□ -1.04
USP16-204ENST00000399976 FARP2O94887 1054 aaPredicted RBP8.54□□□□□ -1.04
USP16-204ENST00000399976 UBA1P22314 1058 aaKnown RBP8.54□□□□□ -1.04
USP16-204ENST00000399976 NFRKBQ6P4R8 1299 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 TLK2Q86UE8 772 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 CCDC82Q8N4S0 544 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 SH3TC2Q8TF17 1288 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 KBTBD13C9JR72 458 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 DHX15O43143 795 aaKnown RBP8.54□□□□□ -1.04
USP16-204ENST00000399976 PSMD10O75832 226 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 LYPLA2O95372 231 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 F2P00734 622 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 LRRC41Q15345 812 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 MTMR9Q96QG7 549 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 SDF4Q9BRK5 362 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 BIN2Q9UBW5 565 aaPredicted RBP8.54□□□□□ -1.04
USP16-204ENST00000399976 CEP131Q9UPN4 1083 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 MRVI1Q9Y6F6 885 aa8.54□□□□□ -1.04
USP16-204ENST00000399976 MMP3P08254 477 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 TXNP10599 105 aaKnown RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 FXR2P51116 673 aaKnown RBP eCLIP8.53□□□□□ -1.04
USP16-204ENST00000399976 PDIA5Q14554 519 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 LARP1BQ659C4 914 aaKnown RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 SAMD1Q6SPF0 538 aaPredicted RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 ANKRD33Q7Z3H0 272 aa8.53□□□□□ -1.04
USP16-204ENST00000399976 FBXO16Q8IX29 292 aaPredicted RBP8.53□□□□□ -1.04
USP16-204ENST00000399976 EXOC8Q8IYI6 725 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms