RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 TEKT4Q8WW24 435 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 TRAIPQ9BWF2 469 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 ATP10BO94823 1461 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 SNAP25P60880 206 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 ST8SIA6P61647 398 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 CAPN12Q6ZSI9 719 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 PPHLN1Q8NEY8 458 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 CFAP36Q96G28 342 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 VPS54Q9P1Q0 977 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 IMPACTQ9P2X3 320 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 FAN1Q9Y2M0 1017 aa11.9□□□□□ -0.5
CACNA1C-210ENST00000399606 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 PSAPP07602 524 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 WASHC5Q12768 1159 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 TMED1Q13445 227 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 PPP2R5BQ15173 497 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 ZNF335Q9H4Z2 1342 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 GARSP41250 739 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 RASSF2P50749 326 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 MOCS3O95396 460 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 SH3BGRP55822 239 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 THOC5Q13769 683 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 PPM1KQ8N3J5 372 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 KRT82Q9NSB4 513 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 PANK4Q9NVE7 773 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 VAMP4O75379 141 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 SERPINI2O75830 405 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 PPARGP37231 505 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 SCARA5Q6ZMJ2 495 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 PHKBQ93100 1093 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 CDHR1Q96JP9 859 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 RPGRIP1Q96KN7 1286 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 LSM14BQ9BX40 385 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 HPS4Q9NQG7 708 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 FAF1Q9UNN5 650 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 KDM6BO15054 1643 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 TMEM94Q12767 1356 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 FCER1AP12319 257 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 KRT15P19012 456 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 PMLP29590 882 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 DPYDQ12882 1025 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 MTMR3Q13615 1198 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 OR6B3Q8NGW1 331 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 NBNO60934 754 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 TROVE2P10155 538 aaKnown RBP eCLIP11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 POLKQ9UBT6 870 aa11.89□□□□□ -0.51
CACNA1C-210ENST00000399606 FAM135BQ49AJ0 1406 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 SLC16A2P36021 539 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 TSC1Q92574 1164 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 HEXIM2Q96MH2 286 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 KCNJ14Q9UNX9 436 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 FLCNQ8NFG4 579 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 SDCCAG3Q96C92 435 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 TMEM63CQ9P1W3 806 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 PEX19P40855 299 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 ANKRD20A3Q5VUR7 823 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 GLYCTKQ8IVS8 523 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 CMTR1Q8N1G2 835 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 U2AF1L4Q8WU68 220 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 DNAJC8O75937 253 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 MYBP10242 640 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 ABCB4P21439 1286 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 TTC23LQ6PF05 361 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 FGD4Q96M96 766 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 POLR2DO15514 142 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 CYBBP04839 570 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 OR6J1Q8NGC5 347 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 ENTPD7Q9NQZ7 604 aa11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-210ENST00000399606 CYP2B6P20813 491 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 U2AF2P26368 475 aaKnown RBP eCLIP11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 NSUN2Q08J23 767 aaKnown RBP eCLIP11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 SYDE2Q5VT97 1194 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 ARMC6Q6NXE6 501 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 HAUS6Q7Z4H7 955 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 HOXC10Q9NYD6 342 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 KLRF2D3W0D1 207 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 BMP3P12645 472 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 ASZ1Q8WWH4 475 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 BLZF1Q9H2G9 400 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 ECE2O60344 883 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 DAB2P98082 770 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 PHLDB3Q6NSJ2 640 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 SECISBP2LQ93073 1101 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 GDAQ9Y2T3 454 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 ERBB3P21860 1342 aa11.87□□□□□ -0.51
CACNA1C-210ENST00000399606 PRRG1O14668 218 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms