RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ARRDC4Q8NCT1 418 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 SKA2Q8WVK7 121 aaPredicted RBP8.69□□□□□ -1.02
USP47-203ENST00000399455 NT5C1BQ96P26 610 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 PSMD14O00487 310 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 STAG1Q8WVM7 1258 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 PPP1R16BQ96T49 567 aa8.69□□□□□ -1.02
USP47-203ENST00000399455 FEZ2Q9UHY8 353 aaPredicted RBP8.69□□□□□ -1.02
USP47-203ENST00000399455 PSMC2P35998 433 aaKnown RBP8.68□□□□□ -1.02
USP47-203ENST00000399455 NLRP12P59046 1061 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 PRPF38AQ8NAV1 312 aaKnown RBP8.68□□□□□ -1.02
USP47-203ENST00000399455 EAF2Q96CJ1 260 aaPredicted RBP8.68□□□□□ -1.02
USP47-203ENST00000399455 ARMCX3Q9UH62 379 aaPredicted RBP8.68□□□□□ -1.02
USP47-203ENST00000399455 PRR5LQ6MZQ0 368 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 DCDC2CA8MYV0 355 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 TRAPPC3O43617 180 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 TFAMQ00059 246 aaKnown RBP8.68□□□□□ -1.02
USP47-203ENST00000399455 ATP2A3Q93084 1043 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 TRIM62Q9BVG3 475 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 VPS16Q9H269 839 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 PCDHB7Q9Y5E2 793 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 MTMR2Q13614 643 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 STK17AQ9UEE5 414 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 ABCC12Q96J65 1359 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 THAP12O43422 761 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 PFKFB2O60825 505 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 GH1P01241 217 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 CYP4A11Q02928 519 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 RASGRF1Q13972 1273 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 COG2Q14746 738 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 CCDC122Q5T0U0 273 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 IGSF22Q8N9C0 903 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 MCPH1Q8NEM0 835 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 TBC1D16Q8TBP0 767 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 DYNLL2Q96FJ2 89 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 GBA2Q9HCG7 927 aaPredicted RBP8.68□□□□□ -1.02
USP47-203ENST00000399455 SYNJ2BP-COX16A0A087WUM0 186 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 ZBTB5O15062 677 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 MOCS3O95396 460 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 CACNB3P54284 484 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 MSTO1Q9BUK6 570 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 FAM107BQ9H098 131 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 ZSWIM4Q9H7M6 989 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 COX16Q9P0S2 106 aa8.68□□□□□ -1.02
USP47-203ENST00000399455 NEXMIFQ5QGS0 1516 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 WDR46O15213 610 aaKnown RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 IER5Q5VY09 327 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 NEK9Q8TD19 979 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 PPP1R9BQ96SB3 815 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 SRRTQ9BXP5 876 aaKnown RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 POLR3EQ9NVU0 708 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 EHD2Q9NZN4 543 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 ZNF70Q9UC06 446 aaPredicted RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 MANSC4A6NHS7 340 aaPredicted RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 HSPA4P34932 840 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 KRT17Q04695 432 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 CMTR1Q8N1G2 835 aaKnown RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 FOXP1Q9H334 677 aaPredicted RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 HPCAL4Q9UM19 191 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 TECPR2O15040 1411 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 ENTPD3O75355 529 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 VPS33BQ9H267 617 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 BLZF1Q9H2G9 400 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 UBN1Q9NPG3 1134 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 MAPK8IP1Q9UQF2 711 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 A0A0D9SFI3 127 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 GTPBP6O43824 516 aaPredicted RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 NSFP46459 744 aaKnown RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 TNNQ9UQP3 1299 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 ZNF202O95125 648 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 RPLP2P05387 115 aaKnown RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 CALRP27797 417 aaKnown RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 PRELPP51888 382 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 TPD52P55327 224 aaPredicted RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 SPATA24Q86W54 205 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.67□□□□□ -1.02
USP47-203ENST00000399455 NR2E3Q9Y5X4 410 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 MYO3AQ8NEV4 1616 aa8.67□□□□□ -1.02
USP47-203ENST00000399455 K7ERI5 159 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 HUS1O60921 280 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 STAG3L1P0CL83 205 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 HMGCS2P54868 508 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 E2F5Q15329 346 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 SDE2Q6IQ49 451 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 LARP4BQ92615 738 aaKnown RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 SELENOSQ9BQE4 189 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 ARHGAP4P98171 946 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 ANKS4BQ8N8V4 417 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 TBCKQ8TEA7 893 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 N4BP2L2Q92802 583 aaPredicted RBP8.66□□□□□ -1.02
USP47-203ENST00000399455 DYRK4Q9NR20 520 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 IFNKQ9P0W0 207 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 PCDHA6Q9UN73 950 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 PCDHA8Q9Y5H6 950 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 MAPK6Q16659 721 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 CROCCP2Q86T23 111 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 CCDC127Q96BQ5 260 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 PARVGQ9HBI0 331 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 KIAA1586Q9HCI6 787 aa8.66□□□□□ -1.02
USP47-203ENST00000399455 AXIN2Q9Y2T1 843 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms