RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 PTPREP23469 700 aa16.68■□□□□ 0.26
ABCC1-201ENST00000399408 SDCCAG8Q86SQ7 713 aaPredicted RBP16.68■□□□□ 0.26
ABCC1-201ENST00000399408 CACNA2D3Q8IZS8 1091 aa16.68■□□□□ 0.26
ABCC1-201ENST00000399408 ADGRB3O60242 1522 aa16.68■□□□□ 0.26
ABCC1-201ENST00000399408 TNS3Q68CZ2 1445 aa16.68■□□□□ 0.26
ABCC1-201ENST00000399408 SUPT20HL1Q3ZLR7 823 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 PNMA8AQ86V59 439 aaPredicted RBP16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CCDC170Q8IYT3 715 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 RNF169Q8NCN4 708 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CEP170P1Q96L14 293 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CDC42BPBQ9Y5S2 1711 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 THAP12O43422 761 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CYP19A1P11511 503 aaPredicted RBP16.67■□□□□ 0.26
ABCC1-201ENST00000399408 NAA35Q5VZE5 725 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CYB5R4Q7L1T6 521 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 PRDX5P30044 214 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CCND2P30279 289 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 SLC12A2P55011 1212 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CCNA1P78396 465 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 PANX2Q96RD6 677 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CYP2D6P10635 497 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 GABPAQ06546 454 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 PDZD4Q76G19 769 aaPredicted RBP16.67■□□□□ 0.26
ABCC1-201ENST00000399408 CCDC13Q8IYE1 715 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 FAM81BQ96LP2 452 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 PARVGQ9HBI0 331 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 PCDHB4Q9Y5E5 795 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 PALM3A6NDB9 673 aaPredicted RBP16.67■□□□□ 0.26
ABCC1-201ENST00000399408 SOWAHDA6NJG2 315 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 ARHGEF2Q92974 986 aaKnown RBP16.67■□□□□ 0.26
ABCC1-201ENST00000399408 ZNF148Q9UQR1 794 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 RXRBP28702 533 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 LRRC63Q05C16 580 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
ABCC1-201ENST00000399408 DDX23Q9BUQ8 820 aaKnown RBP16.67■□□□□ 0.26
ABCC1-201ENST00000399408 NRKQ7Z2Y5 1582 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 TROVE2P10155 538 aaKnown RBP eCLIP16.66■□□□□ 0.26
ABCC1-201ENST00000399408 ZSCAN26Q16670 478 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 GJB4Q9NTQ9 266 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 ABCD1P33897 745 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 PFKFB3Q16875 520 aaPredicted RBP16.66■□□□□ 0.26
ABCC1-201ENST00000399408 FAM133AQ8N9E0 248 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 ZNF579Q8NAF0 562 aaKnown RBP16.66■□□□□ 0.26
ABCC1-201ENST00000399408 CAPS2Q9BXY5 557 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 NDST4Q9H3R1 872 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 MAN1A1P33908 653 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 ALX1Q15699 326 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 GCNT4Q9P109 453 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 AP3B2Q13367 1082 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 GPR162Q16538 588 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 TCP11X2Q5H9J9 407 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 ZNF653Q96CK0 615 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 PCIF1Q9H4Z3 704 aa16.66■□□□□ 0.26
ABCC1-201ENST00000399408 NHEJ1Q9H9Q4 299 aaPredicted RBP16.66■□□□□ 0.26
ABCC1-201ENST00000399408 CROCC2H7BZ55 1655 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 SNAP23O00161 211 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 ATP8B1O43520 1251 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 ATP1A2P50993 1020 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 FAM114A2Q9NRY5 505 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 CD2APQ9Y5K6 639 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 DCAF4Q8WV16 495 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 EIF4A3P38919 411 aaKnown RBP16.65■□□□□ 0.26
ABCC1-201ENST00000399408 SF3A3Q12874 501 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■■■ 27.5
ABCC1-201ENST00000399408 SEPT14Q6ZU15 432 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 TMEM47Q9BQJ4 181 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 MMP10P09238 476 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 SARM1Q6SZW1 724 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 MAP7D3Q8IWC1 876 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 PDE11AQ9HCR9 933 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 KRT31Q15323 416 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 SESTD1Q86VW0 696 aa16.65■□□□□ 0.26
ABCC1-201ENST00000399408 EXOC8Q8IYI6 725 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 RTKN2Q8IZC4 609 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 ANKRD36BP1Q96IX9 119 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 KLHL14Q9P2G3 628 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 RNF14Q9UBS8 474 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 ABCA6Q8N139 1617 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 TLR3O15455 904 aaKnown RBP16.64■□□□□ 0.25
ABCC1-201ENST00000399408 LRRN2O75325 713 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 NDUFA10O95299 355 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 LMNB2Q03252 620 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 KAZNQ674X7 775 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 LY9Q9HBG7 655 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 PFDN4Q9NQP4 134 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 PPP1R2P3Q6NXS1 205 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 CELF1Q92879 486 aaKnown RBP16.64■□□□□ 0.25
ABCC1-201ENST00000399408 MAGOHBQ96A72 148 aaKnown RBP16.64■□□□□ 0.25
ABCC1-201ENST00000399408 ALDH8A1Q9H2A2 487 aaPredicted RBP16.64■□□□□ 0.25
ABCC1-201ENST00000399408 DCP1AQ9NPI6 582 aaPredicted RBP16.64■□□□□ 0.25
ABCC1-201ENST00000399408 CPDO75976 1380 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 INO80B-WBP1J3KQ70 363 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 PGRMC1O00264 195 aaKnown RBP16.64■□□□□ 0.25
ABCC1-201ENST00000399408 SH3BP5O60239 455 aa16.64■□□□□ 0.25
ABCC1-201ENST00000399408 SERPING1P05155 500 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms