RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TRMT13Q9NUP7 481 aaKnown RBP15.48■□□□□ 0.07
VCX3A-202ENST00000398729 TCF20Q9UGU0 1960 aaKnown RBP15.47■□□□□ 0.07
VCX3A-202ENST00000398729 NEFLP07196 543 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 MYOGP15173 224 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 CASTP20810 708 aaKnown RBP15.47■□□□□ 0.07
VCX3A-202ENST00000398729 RABGGTBP53611 331 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 PTPN11Q06124 597 aaPredicted RBP15.47■□□□□ 0.07
VCX3A-202ENST00000398729 RAB30Q15771 203 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 DGKDQ16760 1214 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 TSGA10IPQ3SY00 556 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 DHX32Q7L7V1 743 aaKnown RBP15.47■□□□□ 0.07
VCX3A-202ENST00000398729 DHX37Q8IY37 1157 aaKnown RBP15.47■□□□□ 0.07
VCX3A-202ENST00000398729 FANCBQ8NB91 859 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 IL31RAQ8NI17 732 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 EMID1Q96A84 441 aaPredicted RBP15.47■□□□□ 0.07
VCX3A-202ENST00000398729 NECAB3Q96P71 396 aaPredicted RBP15.47■□□□□ 0.07
VCX3A-202ENST00000398729 SLC28A3Q9HAS3 691 aa15.47■□□□□ 0.07
VCX3A-202ENST00000398729 RGS20O76081 388 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 TGFB3P10600 412 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 CYP2C9P11712 490 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 CCL23P55773 120 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 CHMP4BP1P59074 171 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 MICU3Q86XE3 530 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 RAB11FIP4Q86YS3 637 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 CMTR1Q8N1G2 835 aaKnown RBP15.46■□□□□ 0.07
VCX3A-202ENST00000398729 PPTC7Q8NI37 304 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 MYH7BA7E2Y1 1941 aa15.46■□□□□ 0.07
VCX3A-202ENST00000398729 PIK3CDO00329 1044 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 STAM2O75886 525 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 HMGB1P09429 215 aaKnown RBP15.45■□□□□ 0.06
VCX3A-202ENST00000398729 EXOSC10Q01780 885 aaKnown RBP15.45■□□□□ 0.06
VCX3A-202ENST00000398729 TFF2Q03403 129 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 ADCK5Q3MIX3 580 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 GNPTABQ3T906 1256 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 APOA5Q6Q788 366 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 TMTC3Q6ZXV5 915 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 RASEFQ8IZ41 740 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 RPUSD2Q8IZ73 545 aaKnown RBP15.45■□□□□ 0.06
VCX3A-202ENST00000398729 CCDC82Q8N4S0 544 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 KATNAL1Q9BW62 490 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 WNT8AQ9H1J5 351 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 MTIF3Q9H2K0 278 aaKnown RBP15.45■□□□□ 0.06
VCX3A-202ENST00000398729 NOD1Q9Y239 953 aa15.45■□□□□ 0.06
VCX3A-202ENST00000398729 FRMPD4Q14CM0 1322 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 MEIS2O14770 477 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 GGPS1O95749 300 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 CELF3Q5SZQ8 465 aaKnown RBP15.44■□□□□ 0.06
VCX3A-202ENST00000398729 MYSM1Q5VVJ2 828 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 USP17L6PQ6QN14 398 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 SESTD1Q86VW0 696 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 PPP1R13LQ8WUF5 828 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 ZFP91Q96JP5 570 aaPredicted RBP15.44■□□□□ 0.06
VCX3A-202ENST00000398729 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 SPATA33Q96N06 139 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 RBM28Q9NW13 759 aaKnown RBP15.44■□□□□ 0.06
VCX3A-202ENST00000398729 GBF1Q92538 1859 aa15.44■□□□□ 0.06
VCX3A-202ENST00000398729 RFXAPO00287 272 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 ZBTB43O43298 467 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 PPFIA4O75335 1185 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 UBA1P22314 1058 aaKnown RBP15.43■□□□□ 0.06
VCX3A-202ENST00000398729 PLA2G5P39877 138 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 MRPS9P82933 396 aaKnown RBP15.43■□□□□ 0.06
VCX3A-202ENST00000398729 SP2Q02086 613 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 BFSP2Q13515 415 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 RTN1Q16799 776 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 XRRA1Q6P2D8 792 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 RETREG2Q8NC44 543 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 KAT2BQ92831 832 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 SCLYQ96I15 445 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 INPP4AQ96PE3 977 aaPredicted RBP15.43■□□□□ 0.06
VCX3A-202ENST00000398729 PSTPIP2Q9H939 334 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 MLXIPQ9HAP2 919 aa15.43■□□□□ 0.06
VCX3A-202ENST00000398729 hCG_1642624A0A1W2PR95 340 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 FIBPO43427 364 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 SORBS3O60504 671 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 REC8O95072 547 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 F2P00734 622 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 PFKMP08237 780 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 HOXD8P13378 290 aaPredicted RBP15.42■□□□□ 0.06
VCX3A-202ENST00000398729 ICAM3P32942 547 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 PSEN2P49810 448 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 FGD1P98174 961 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 PTGISQ16647 500 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 HSDL1Q3SXM5 330 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 PCNX4Q63HM2 1172 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 HEATR3Q7Z4Q2 680 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 C7orf31Q8N865 590 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 GPKOWQ92917 476 aaPredicted RBP eCLIP15.42■□□□□ 0.06
VCX3A-202ENST00000398729 RTEL1Q9NZ71 1219 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 BRPF3Q9ULD4 1205 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 PCDHA11Q9Y5I1 949 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 SLC4A7Q9Y6M7 1214 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 PIEZO1Q92508 2521 aa15.42■□□□□ 0.06
VCX3A-202ENST00000398729 KLF18A0A0U1RQI7 1052 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 GOLGA8AA7E2F4 631 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 GOLGA8BA8MQT2 603 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 SPATA31C2B4DYI2 1134 aa15.41■□□□□ 0.06
VCX3A-202ENST00000398729 ZNF286BP0CG31 522 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms