RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GNAQP50148 359 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 ATP2B2Q01814 1243 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 PDCLQ13371 301 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 ZKSCAN8Q15776 578 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 SNCBQ16143 134 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 RNF187Q5TA31 235 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 NFRKBQ6P4R8 1299 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 TPTE2Q6XPS3 522 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 ZSCAN29Q8IWY8 852 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 CCDC13Q8IYE1 715 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 CCDC24Q8N4L8 307 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 TRIM58Q8NG06 486 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 RUBCNQ92622 972 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 SLC40A1Q9NP59 571 aa17.64■□□□□ 0.41
CHMP1A-201ENST00000397901 LAD1O00515 517 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 EIF4A3P38919 411 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 PRPHP41219 470 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 KIF11P52732 1056 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 CLNS1AP54105 237 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 NAPAP54920 295 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 C12orf60Q5U649 245 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 ALS2CLQ60I27 953 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 C7orf25Q9BPX7 421 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 EPN3Q9H201 632 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 CENPHQ9H3R5 247 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 CUEDC2Q9H467 287 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 SH2D4AQ9H788 454 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 MMRN2Q9H8L6 949 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 KIAA1551Q9HCM1 1747 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 A0A1W2PQJ5 194 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 NAA35Q5VZE5 725 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 TXNRD3Q86VQ6 643 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 ANKRD13CQ8N6S4 541 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 DDX20Q9UHI6 824 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-201ENST00000397901 KLHL33A6NCF5 533 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 NCK2O43639 380 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 AKR1B10O60218 316 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 CDK17Q00537 523 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 SPATA4Q8NEY3 305 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 AK8Q96MA6 479 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 ANKRD2Q9GZV1 360 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 MAGEF1Q9HAY2 307 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 VWA3BQ502W6 1294 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 FIGNQ5HY92 759 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 GALNT17Q6IS24 598 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 MMGT1Q8N4V1 131 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 SH3RF3Q8TEJ3 882 aaPredicted RBP17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 OSBPL9Q96SU4 736 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 PLAGL2Q9UPG8 496 aa17.62■□□□□ 0.41
CHMP1A-201ENST00000397901 GOLGA6L7A0A1B0GV03 622 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 NONOQ15233 471 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 TTMPQ5BVD1 217 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 CNNM4Q6P4Q7 775 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 RRAGAQ7L523 313 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 CEP57Q86XR8 500 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 PARP9Q8IXQ6 854 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 ZNF473Q8WTR7 871 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 NDST4Q9H3R1 872 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 ACTR5Q9H9F9 607 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 SIK3Q9Y2K2 1263 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 LRRC53A6NM62 1247 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 KLRF2D3W0D1 207 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 GRIK3Q13003 919 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 SEMA3FQ13275 785 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 CCDC181Q5TID7 509 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 DYMQ7RTS9 669 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 MMTAG2Q9BU76 263 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 ATP6V0A4Q9HBG4 840 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 VAT1LQ9HCJ6 419 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 SAP30BPQ9UHR5 308 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 MYH1P12882 1939 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 MYH10P35580 1976 aa17.61■□□□□ 0.41
CHMP1A-201ENST00000397901 SMCO2A6NFE2 343 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 HSF2BPO75031 334 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 LSP1P33241 339 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 AMPD3Q01432 767 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 TLDC1Q6P9B6 456 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 ZNF444Q8N0Y2 327 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 ANKS1AQ92625 1134 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 ARL8AQ96BM9 186 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 GJD4Q96KN9 370 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 IRS2Q9Y4H2 1338 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 PALM3A6NDB9 673 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 TXKP42681 527 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 DIXDC1Q155Q3 683 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 KDM7AQ6ZMT4 941 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 KRT25Q7Z3Z0 450 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 CALML4Q96GE6 196 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 ALS2CR12Q96Q35 445 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 SALL4Q9UJQ4 1053 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 HYOU1Q9Y4L1 999 aa17.6■□□□□ 0.41
CHMP1A-201ENST00000397901 CENPPQ6IPU0 288 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 NEK8Q86SG6 692 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 ZMYND12Q9H0C1 365 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 MYMKA6NI61 221 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 BUB1O43683 1085 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 HNRNPH3P31942 346 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms