RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 TTC28Q96AY4 2481 aa16.53■□□□□ 0.24
SNRNP25-203ENST00000397876 HAS3O00219 553 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 SORBS3O60504 671 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 PPFIA4O75335 1185 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 TGFB3P10600 412 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 ANTXR2P58335 489 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 PTK7Q13308 1070 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 GNPTABQ3T906 1256 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 MB21D2Q8IYB1 491 aaPredicted RBP16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 ATXN2LQ8WWM7 1075 aaKnown RBP16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 MAP4K1Q92918 833 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 RBM8AQ9Y5S9 174 aaKnown RBP16.52■□□□□ 0.24
SNRNP25-203ENST00000397876 TRIP12Q14669 1992 aaPredicted RBP16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 MYH7BA7E2Y1 1941 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 SPTBN5Q9NRC6 3674 aaKnown RBP16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 DDAH1O94760 285 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 CKBP12277 381 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 KIF5BP33176 963 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 CNKSR3Q6P9H4 555 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 CASC1Q6TDU7 716 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 MICALL1Q8N3F8 863 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 IGDCC4Q8TDY8 1250 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 PIBF1Q8WXW3 757 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 TSPYL2Q9H2G4 693 aaPredicted RBP16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 BAZ2BQ9UIF8 2168 aaKnown RBP16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 TET1Q8NFU7 2136 aa16.51■□□□□ 0.23
SNRNP25-203ENST00000397876 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 FRMPD4Q14CM0 1322 aa16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 STAM2O75886 525 aa16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 WDR5P61964 334 aaKnown RBP16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 RRP36Q96EU6 259 aaKnown RBP16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 ZFP91Q96JP5 570 aaPredicted RBP16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 MTA3Q9BTC8 594 aa16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 SPZ1Q9BXG8 430 aa16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 SEC63Q9UGP8 760 aaKnown RBP16.5■□□□□ 0.23
SNRNP25-203ENST00000397876 NOP56O00567 594 aaKnown RBP16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 PRC1O43663 620 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 TLL1O43897 1013 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 CXCL10P02778 98 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 MRPS5P82675 430 aaKnown RBP16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 SP2Q02086 613 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 NFXL1Q6ZNB6 911 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 GPKOWQ92917 476 aaPredicted RBP eCLIP16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 CUL5Q93034 780 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 ASB2Q96Q27 587 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 LZTS2Q9BRK4 669 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 CERS4Q9HA82 394 aa16.49■□□□□ 0.23
SNRNP25-203ENST00000397876 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 NBNO60934 754 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 EFCAB14O75071 495 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 MCM5P33992 734 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 GNAQP50148 359 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 TAP1Q03518 808 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 NEDD9Q14511 834 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 GPNMBQ14956 572 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 TRIM71Q2Q1W2 868 aaKnown RBP16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 ARNTL2Q8WYA1 636 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 INPP4AQ96PE3 977 aaPredicted RBP16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 C16orf70Q9BSU1 422 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
SNRNP25-203ENST00000397876 EMSYQ7Z589 1322 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 PTPRSQ13332 1948 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 ABHD14A-ACY1A0A1B0GW23 586 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 C17orf102A2RUQ5 167 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 H3BRB1 525 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 FIBPO43427 364 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 LGALS2P05162 132 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 ICAM3P32942 547 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 ZNF200P98182 395 aaPredicted RBP16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 ZNF618Q5T7W0 954 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 METTL7BQ6UX53 244 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 SERINC5Q86VE9 423 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 TMTC2Q8N394 836 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 WNT8BQ93098 351 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 TMEM87BQ96K49 555 aa16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 TUT1Q9H6E5 874 aaKnown RBP16.47■□□□□ 0.23
SNRNP25-203ENST00000397876 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 TNFRSF10AO00220 468 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 RFXAPO00287 272 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 SH2B2O14492 632 aaPredicted RBP16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 ARHGEF15O94989 841 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 CALM1P0DP23 149 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 CALM2P0DP24 149 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 CALM3P0DP25 149 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 POU3F3P20264 500 aaPredicted RBP16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 THPOP40225 353 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 DEFB103AP81534 67 aa16.46■□□□□ 0.23
SNRNP25-203ENST00000397876 IKBKEQ14164 716 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms