RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TDP2O95551 362 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 BAG3O95817 575 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 RASA1P20936 1047 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 TM4SF1P30408 202 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 LONP1P36776 959 aaKnown RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 TNNI2P48788 182 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CDK8P49336 464 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CACNB3P54284 484 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 USP14P54578 494 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 NAP1L1P55209 391 aaKnown RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 RNASE9P60153 205 aaKnown RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 SNAP25P60880 206 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 SOGA3Q5TF21 947 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 WDR59Q6PJI9 974 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 TMTC1Q8IUR5 882 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 ELOA2Q8IYF1 753 aaPredicted RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 ADSSL1Q8N142 457 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CNBD1Q8NA66 436 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CAGE1Q8TC20 777 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 BORCS6Q96GS4 357 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CNOT6LQ96LI5 555 aaKnown RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 SCLT1Q96NL6 688 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 MMS19Q96T76 1030 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 NUDT12Q9BQG2 462 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 NAA15Q9BXJ9 866 aaKnown RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 ANKRD2Q9GZV1 360 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 EHD4Q9H223 541 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 HOMER3Q9NSC5 361 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 EXOC1Q9NV70 894 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 EHD2Q9NZN4 543 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 SEC63Q9UGP8 760 aaKnown RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 LIMA1Q9UHB6 759 aaKnown RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 NARFQ9UHQ1 456 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 PHLPP1O60346 1717 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 EME2A4GXA9 379 aaPredicted RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 EPHB6O15197 1021 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CAND2O75155 1236 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 FGRP09769 529 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 TAL1P17542 331 aaPredicted RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 PRPHP41219 470 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 RCAN1P53805 252 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 GTF2IP78347 998 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 GPSM2P81274 684 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 IFFO1Q0D2I5 559 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CCDC96Q2M329 555 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 SHROOM1Q2M3G4 852 aaPredicted RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 TLDC1Q6P9B6 456 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 KCTD1Q719H9 257 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 DNAAF5Q86Y56 855 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 C2CD5Q86YS7 1000 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CCDC13Q8IYE1 715 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 MAB21L3Q8N8X9 362 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 OR8K1Q8NGG5 319 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 RPGRQ92834 1020 aaKnown RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 SPDL1Q96EA4 605 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 CCDC114Q96M63 670 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 MTA3Q9BTC8 594 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 PAGR1Q9BTK6 254 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 NYXQ9GZU5 481 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 ACTR5Q9H9F9 607 aaPredicted RBP5.54□□□□□ -1.52
SSR1-202ENST00000397511 NLRC4Q9NPP4 1024 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 RMND1Q9NWS8 449 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 BARHL2Q9NY43 387 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 TIAM2Q8IVF5 1701 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 TARSL2A2RTX5 802 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 SLC37A4O43826 429 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 KLRC4O43908 158 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 AP1G2O75843 785 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 PECAM1P16284 738 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 PEX19P40855 299 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 RPS6KA3P51812 740 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 HERVK_113P62684 666 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TCP10Q12799 353 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TTBK2Q6IQ55 1244 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 DGKHQ86XP1 1220 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 NELFCDQ8IXH7 590 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 CDK5RAP3Q96JB5 506 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 RUFY1Q96T51 708 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 SH3GL2Q99962 352 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TRIM9Q9C026 710 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TMX4Q9H1E5 349 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 NHEJ1Q9H9Q4 299 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 MYO1AQ9UBC5 1043 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TTF2Q9UNY4 1162 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 LRP5O75197 1615 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 ZC3H4Q9UPT8 1303 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 PLCH1Q4KWH8 1693 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 H7C1D1 291 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 BUB1O43683 1085 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 SKAP2O75563 359 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 OR52Z1P0C646 297 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 NEFHP12036 1026 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TRAPPC10P48553 1259 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 SKOR1P84550 965 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 SLC7A5Q01650 507 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 C2orf54Q08AI8 447 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 GRM4Q14833 912 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 NONOQ15233 471 aaKnown RBP eCLIP5.53□□□□□ -1.52
SSR1-202ENST00000397511 DOK7Q18PE1 504 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms