RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CABYRO75952 493 aa28.97■■■□□ 2.23
TSPAN4-207ENST00000397411 FAM177A1Q8N128 213 aaPredicted RBP28.97■■■□□ 2.23
TSPAN4-207ENST00000397411 CDHR1Q96JP9 859 aa28.97■■■□□ 2.23
TSPAN4-207ENST00000397411 ALG1Q9BT22 464 aa28.97■■■□□ 2.23
TSPAN4-207ENST00000397411 PCDHA4Q9UN74 947 aa28.97■■■□□ 2.23
TSPAN4-207ENST00000397411 ATP11BQ9Y2G3 1177 aa28.97■■■□□ 2.23
TSPAN4-207ENST00000397411 SPATA31C2B4DYI2 1134 aa28.96■■■□□ 2.23
TSPAN4-207ENST00000397411 KPNA6O60684 536 aa28.96■■■□□ 2.23
TSPAN4-207ENST00000397411 GGPS1O95749 300 aa28.96■■■□□ 2.23
TSPAN4-207ENST00000397411 RTP1P59025 263 aa28.96■■■□□ 2.23
TSPAN4-207ENST00000397411 GALNT17Q6IS24 598 aa28.96■■■□□ 2.23
TSPAN4-207ENST00000397411 NSUN7Q8NE18 718 aaKnown RBP28.96■■■□□ 2.23
TSPAN4-207ENST00000397411 AFG1LQ8WV93 481 aa28.96■■■□□ 2.23
TSPAN4-207ENST00000397411 ELP1O95163 1332 aa28.95■■■□□ 2.23
TSPAN4-207ENST00000397411 ICAM3P32942 547 aa28.95■■■□□ 2.22
TSPAN4-207ENST00000397411 ARHGAP1Q07960 439 aa28.95■■■□□ 2.22
TSPAN4-207ENST00000397411 NEDD9Q14511 834 aa28.95■■■□□ 2.22
TSPAN4-207ENST00000397411 CELF3Q5SZQ8 465 aaKnown RBP28.95■■■□□ 2.22
TSPAN4-207ENST00000397411 BLIDQ8IZY5 108 aa28.95■■■□□ 2.22
TSPAN4-207ENST00000397411 RASGRP4Q8TDF6 673 aa28.95■■■□□ 2.22
TSPAN4-207ENST00000397411 GPRASP2Q96D09 838 aa28.95■■■□□ 2.22
TSPAN4-207ENST00000397411 A6NJR5 290 aa28.94■■■□□ 2.22
TSPAN4-207ENST00000397411 SREBF1P36956 1147 aa28.94■■■□□ 2.22
TSPAN4-207ENST00000397411 TRIM29Q14134 588 aa28.94■■■□□ 2.22
TSPAN4-207ENST00000397411 SPATA33Q96N06 139 aa28.94■■■□□ 2.22
TSPAN4-207ENST00000397411 JADE2Q9NQC1 790 aa28.94■■■□□ 2.22
TSPAN4-207ENST00000397411 KCNJ14Q9UNX9 436 aa28.94■■■□□ 2.22
TSPAN4-207ENST00000397411 UBIAD1Q9Y5Z9 338 aa28.94■■■□□ 2.22
TSPAN4-207ENST00000397411 A0A0U1RQG5 324 aaPredicted RBP28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 ADAMTS3O15072 1205 aa28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 JAK2O60674 1132 aa28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 UBA1P22314 1058 aaKnown RBP28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 MCM2P49736 904 aa28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 ARHGAP4P98171 946 aa28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 SP2Q02086 613 aa28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 MTMR1Q13613 665 aa28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 MXRA8Q9BRK3 442 aa28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 LLPHQ9BRT6 129 aaKnown RBP28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 MTG1Q9BT17 334 aaPredicted RBP28.93■■■□□ 2.22
TSPAN4-207ENST00000397411 MAFGO15525 162 aa28.92■■■□□ 2.22
TSPAN4-207ENST00000397411 ITGB5P18084 799 aa28.92■■■□□ 2.22
TSPAN4-207ENST00000397411 TRIM60Q495X7 471 aa28.92■■■□□ 2.22
TSPAN4-207ENST00000397411 MYSM1Q5VVJ2 828 aa28.92■■■□□ 2.22
TSPAN4-207ENST00000397411 GIMAP8Q8ND71 665 aaPredicted RBP28.92■■■□□ 2.22
TSPAN4-207ENST00000397411 ALPK3Q96L96 1907 aa28.92■■■□□ 2.22
TSPAN4-207ENST00000397411 MMP3P08254 477 aa28.91■■■□□ 2.22
TSPAN4-207ENST00000397411 FDPSP14324 419 aaKnown RBP28.91■■■□□ 2.22
TSPAN4-207ENST00000397411 CHMP4BP1P59074 171 aa28.91■■■□□ 2.22
TSPAN4-207ENST00000397411 DGKDQ16760 1214 aa28.91■■■□□ 2.22
TSPAN4-207ENST00000397411 CYFIP1Q7L576 1253 aa28.91■■■□□ 2.22
TSPAN4-207ENST00000397411 EMID1Q96A84 441 aaPredicted RBP28.91■■■□□ 2.22
TSPAN4-207ENST00000397411 PKD2L1Q9P0L9 805 aa28.91■■■□□ 2.22
TSPAN4-207ENST00000397411 PRKAG2Q9UGJ0 569 aa28.91■■■□□ 2.22
TSPAN4-207ENST00000397411 H0YGN5 161 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 NOP56O00567 594 aaKnown RBP28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 FOSBP53539 338 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 PURAQ00577 322 aaKnown RBP28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 CEP55Q53EZ4 464 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 C1orf53Q5VUE5 145 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 FAM184AQ8NB25 1140 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 DAGLBQ8NCG7 672 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 PPTC7Q8NI37 304 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 SENP7Q9BQF6 1050 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 PHF20Q9BVI0 1012 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 BRMS1Q9HCU9 246 aa28.9■■■□□ 2.22
TSPAN4-207ENST00000397411 DCDC2CA8MYV0 355 aa28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 ARVCFO00192 962 aa28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 PQBP1O60828 265 aaKnown RBP28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 TLE2Q04725 743 aa28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 ST3GAL1Q11201 340 aa28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 SEMA3FQ13275 785 aa28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 ITGA7Q13683 1181 aa28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 SNX17Q15036 470 aa28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 GJB4Q9NTQ9 266 aa28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 ZMYND8Q9ULU4 1186 aaPredicted RBP28.89■■■□□ 2.22
TSPAN4-207ENST00000397411 CYP3A4P08684 503 aa28.88■■■□□ 2.21
TSPAN4-207ENST00000397411 PSMC6P62333 389 aa28.88■■■□□ 2.21
TSPAN4-207ENST00000397411 HMGN5P82970 282 aaKnown RBP28.88■■■□□ 2.21
TSPAN4-207ENST00000397411 SP4Q02446 784 aa28.88■■■□□ 2.21
TSPAN4-207ENST00000397411 METTL7BQ6UX53 244 aa28.88■■■□□ 2.21
TSPAN4-207ENST00000397411 PLA2G4DQ86XP0 818 aa28.88■■■□□ 2.21
TSPAN4-207ENST00000397411 CYP2W1Q8TAV3 490 aa28.88■■■□□ 2.21
TSPAN4-207ENST00000397411 MROH7Q68CQ1 1323 aa28.88■■■□□ 2.21
TSPAN4-207ENST00000397411 CCDC194A0A1B0GVG4 234 aa28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 PPFIA4O75335 1185 aa28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 HSDL1Q3SXM5 330 aa28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 KRT25Q7Z3Z0 450 aa28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 TMX3Q96JJ7 454 aa28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 SEZ6LQ9BYH1 1024 aa28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 BCAS3Q9H6U6 928 aa28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 PRDM5Q9NQX1 630 aaPredicted RBP28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 KCNH7Q9NS40 1196 aa28.87■■■□□ 2.21
TSPAN4-207ENST00000397411 MEIS1O00470 390 aa28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 TLR3O15455 904 aaKnown RBP28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 ATP9AO75110 1047 aa28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 ARP10275 920 aa28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 SYN1P17600 705 aa28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 NONOQ15233 471 aaKnown RBP eCLIP28.86■■■□□ 2.214e-6■■■■□ 24.4
TSPAN4-207ENST00000397411 FAM47CQ5HY64 1035 aa28.86■■■□□ 2.21
TSPAN4-207ENST00000397411 PRPF38BQ5VTL8 546 aaKnown RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms