RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ODF2LQ9ULJ1 636 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 PACSIN2Q9UNF0 486 aaPredicted RBP26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 MYH1P12882 1939 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 OR52Z1P0C646 297 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 ARID5AQ03989 594 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 CFAP221Q4G0U5 840 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 GJA10Q969M2 543 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 CCDC114Q96M63 670 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 ERGIC2Q96RQ1 377 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 ARPP21Q9UBL0 812 aaPredicted RBP26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 BIN2Q9UBW5 565 aaPredicted RBP26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 ITGB3BPQ13352 177 aaPredicted RBP26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 CCSER1Q9C0I3 900 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 TMEM260Q9NX78 707 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 DLEC1Q9Y238 1755 aa26.46■■□□□ 1.83
CSNK1E-203ENST00000396832 BICDL2A1A5D9 508 aa26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 WLSQ5T9L3 541 aa26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 CCDC121Q6ZUS5 278 aa26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 FAM170AA1A519 330 aa26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 HPDP32754 393 aaPredicted RBP26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 SLC1A4P43007 532 aa26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 MREGQ8N565 214 aa26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 SH3RF3Q8TEJ3 882 aaPredicted RBP26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 MTMR8Q96EF0 704 aa26.45■■□□□ 1.82
CSNK1E-203ENST00000396832 PHLPP1O60346 1717 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 HMGB1P1B2RPK0 211 aaPredicted RBP26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 HNRNPH3P31942 346 aaKnown RBP26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 MAGEA1P43355 309 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 USP17L2Q6R6M4 530 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 CCDC47Q96A33 483 aaKnown RBP26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 CYFIP2Q96F07 1278 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 NDST4Q9H3R1 872 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 VEZTQ9HBM0 779 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 DRP2Q13474 957 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 KLHDC7AQ5VTJ3 777 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 MAATS1Q7Z4T9 603 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 CEP57Q86XR8 500 aa26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 GPR101Q96P66 508 aaPredicted RBP26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 BSDC1Q9NW68 430 aaPredicted RBP26.44■■□□□ 1.82
CSNK1E-203ENST00000396832 ABCA3Q99758 1704 aa26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 HIBADHP31937 336 aaKnown RBP26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 FAM114A1Q8IWE2 563 aa26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 MIEF2Q96C03 454 aa26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 BARHL2Q9NY43 387 aa26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 POTEMA6NI47 508 aa26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 LCA5LO95447 670 aa26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 PCP11498 1178 aaKnown RBP26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 ZSCAN29Q8IWY8 852 aaPredicted RBP26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 TGFBRAP1Q8WUH2 860 aa26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 ATP8A2Q9NTI2 1148 aa26.43■■□□□ 1.82
CSNK1E-203ENST00000396832 KLRF2D3W0D1 207 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 FTCDO95954 541 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 TRADDQ15628 312 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 GRIK5Q16478 980 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 VWA3BQ502W6 1294 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 PPP4R3AQ6IN85 833 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 MAPKAPK5Q8IW41 473 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 CASKIN2Q8WXE0 1202 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 MMTAG2Q9BU76 263 aaKnown RBP26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 TBC1D7Q9P0N9 293 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 SMCO2A6NFE2 343 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 PDHBP11177 359 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 SNCBQ16143 134 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 CACNA2D4Q7Z3S7 1137 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 DNAAF5Q86Y56 855 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 PARP9Q8IXQ6 854 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 TBCKQ8TEA7 893 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 TMEM47Q9BQJ4 181 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 UBA5Q9GZZ9 404 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 PLAAQ9Y263 795 aa26.42■■□□□ 1.82
CSNK1E-203ENST00000396832 SSBP05455 408 aaKnown RBP eCLIP26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 GRM4Q14833 912 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 PROCA1Q8NCQ7 364 aaPredicted RBP26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 C1orf131Q8NDD1 294 aaKnown RBP26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 CASZ1Q86V15 1759 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 GOLGA6L7A0A1B0GV03 622 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 MYMKA6NI61 221 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 NOX5Q96PH1 765 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 ACTR5Q9H9F9 607 aaPredicted RBP26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 SIK3Q9Y2K2 1263 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 CLSTN1O94985 981 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 CYB5D1Q6P9G0 228 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 KRT12Q99456 494 aa26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 DDX20Q9UHI6 824 aaKnown RBP26.41■■□□□ 1.82
CSNK1E-203ENST00000396832 SRRM3A6NNA2 597 aaPredicted RBP26.4■■□□□ 1.82
CSNK1E-203ENST00000396832 FUKQ8N0W3 1084 aa26.4■■□□□ 1.82
CSNK1E-203ENST00000396832 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
CSNK1E-203ENST00000396832 FBXO33Q7Z6M2 555 aa26.4■■□□□ 1.82
CSNK1E-203ENST00000396832 WHAMMQ8TF30 809 aa26.4■■□□□ 1.82
CSNK1E-203ENST00000396832 RNF14Q9UBS8 474 aa26.4■■□□□ 1.82
CSNK1E-203ENST00000396832 DNM1LO00429 736 aa26.39■■□□□ 1.82
CSNK1E-203ENST00000396832 MYL1P05976 194 aa26.39■■□□□ 1.82
CSNK1E-203ENST00000396832 NONOQ15233 471 aaKnown RBP eCLIP26.39■■□□□ 1.82
CSNK1E-203ENST00000396832 SPRED3Q2MJR0 410 aa26.39■■□□□ 1.82
CSNK1E-203ENST00000396832 ZNF444Q8N0Y2 327 aaPredicted RBP26.39■■□□□ 1.82
CSNK1E-203ENST00000396832 NUDT12Q9BQG2 462 aa26.39■■□□□ 1.82
CSNK1E-203ENST00000396832 OSBPL7Q9BZF2 842 aa26.39■■□□□ 1.82
CSNK1E-203ENST00000396832 TMBIM4Q9HC24 238 aa26.39■■□□□ 1.82
CSNK1E-203ENST00000396832 DOT1LQ8TEK3 1739 aa26.39■■□□□ 1.81
CSNK1E-203ENST00000396832 GMNCA6NCL1 334 aa26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms