RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SPRED3Q2MJR0 410 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 KLHDC7AQ5VTJ3 777 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 ATP6V1G3Q96LB4 118 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
TRIM39-203ENST00000396547 SLC24A3Q9HC58 644 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 TCP11L1Q9NUJ3 509 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 CNTNAP5Q8WYK1 1306 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 OPLAHO14841 1288 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 CPLX4Q7Z7G2 160 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 FAM114A1Q8IWE2 563 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 IQCKQ8N0W5 287 aa10.85□□□□□ -0.67
TRIM39-203ENST00000396547 C10orf71Q711Q0 1435 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 LAMB2P55268 1798 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 BICDL2A1A5D9 508 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 PHF20L1A8MW92 1017 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 TMCO5BA8MYB1 307 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 KCNK3O14649 394 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 CLGNO14967 610 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 RAD51CO43502 376 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 CCNT1O60563 726 aaKnown RBP10.84□□□□□ -0.67
TRIM39-203ENST00000396547 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
TRIM39-203ENST00000396547 QPCTQ16769 361 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 VWA3BQ502W6 1294 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 CYFIP2Q96F07 1278 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 DHTKD1Q96HY7 919 aaPredicted RBP10.84□□□□□ -0.67
TRIM39-203ENST00000396547 PURBQ96QR8 312 aaKnown RBP10.84□□□□□ -0.67
TRIM39-203ENST00000396547 BAIAP2L1Q9UHR4 511 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 NOVA2Q9UNW9 492 aaKnown RBP10.84□□□□□ -0.67
TRIM39-203ENST00000396547 GCOM1H8Y6P7 765 aaPredicted RBP10.84□□□□□ -0.67
TRIM39-203ENST00000396547 CEP104O60308 925 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 SKAP2O75563 359 aaPredicted RBP10.84□□□□□ -0.67
TRIM39-203ENST00000396547 NEBLO76041 1014 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 RHOBTB3O94955 611 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 FSBPO95073 299 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 MYZAPP0CAP1 466 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 TXKP42681 527 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 NEDD9Q14511 834 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 KDM7AQ6ZMT4 941 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 TBC1D5Q92609 795 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 TAF4BQ92750 862 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 SEMA6BQ9H3T3 888 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 PLAGL2Q9UPG8 496 aa10.84□□□□□ -0.67
TRIM39-203ENST00000396547 TLDC2A0PJX2 215 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 CLNS1AP54105 237 aaKnown RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 POLR2FP61218 127 aaKnown RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 RAPGEF1Q13905 1077 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 NAA25Q14CX7 972 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 KIAA0753Q2KHM9 967 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 CHADLQ6NUI6 762 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 ADAT2Q7Z6V5 191 aaKnown RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 COL23A1Q86Y22 540 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 GLIS3Q8NEA6 775 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 MDM1Q8TC05 714 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 PIK3R5Q8WYR1 880 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 ZNF512BQ96KM6 892 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 PACSIN1Q9BY11 444 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 ADAMTS1Q9UHI8 967 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 ZBTB1Q9Y2K1 713 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 EPB41P11171 864 aaKnown RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 KLRC1P26715 233 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 ELF1P32519 619 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 PPP2R5AQ15172 486 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 SNCBQ16143 134 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 C4orf32Q8N8J7 132 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 CAVIN3Q969G5 261 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 PLA2G12BQ9BX93 195 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 TRIM9Q9C026 710 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 DPH5Q9H2P9 285 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 ZHX3Q9H4I2 956 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 VCPKMTQ9H867 229 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 VEZTQ9HBM0 779 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 DONSONQ9NYP3 566 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 SPEF2Q9C093 1822 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 DNM1LO00429 736 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 HGSO14964 777 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 CALM1P0DP23 149 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 CALM2P0DP24 149 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 CALM3P0DP25 149 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 FGFR2P21802 821 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 GBP2P32456 591 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 TRIM28Q13263 835 aaKnown RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 PFKFB3Q16875 520 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 RPAINQ86UA6 219 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 UHMK1Q8TAS1 419 aaKnown RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 DDX20Q9UHI6 824 aaKnown RBP10.83□□□□□ -0.68
TRIM39-203ENST00000396547 STX8Q9UNK0 236 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 SRCAPQ6ZRS2 3230 aa10.83□□□□□ -0.68
TRIM39-203ENST00000396547 NUP98P52948 1817 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 GMNCA6NCL1 334 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 DCDC2CA8MYV0 355 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 FAM107AO95990 144 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 IGHMBP2P38935 993 aaKnown RBP10.82□□□□□ -0.68
TRIM39-203ENST00000396547 PPP2R5BQ15173 497 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 PNMA8AQ86V59 439 aaPredicted RBP10.82□□□□□ -0.68
TRIM39-203ENST00000396547 DZIP3Q86Y13 1208 aaKnown RBP10.82□□□□□ -0.68
TRIM39-203ENST00000396547 PARP9Q8IXQ6 854 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 CCDC87Q9NVE4 849 aa10.82□□□□□ -0.68
TRIM39-203ENST00000396547 MROH5Q6ZUA9 1318 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms